KEGG   Ipomoea triloba (trilobed morning glory): 116022049
Entry
116022049         CDS       T07384                                 
Name
(RefSeq) DNA-directed RNA polymerases IV and V subunit 2-like isoform X1
  KO
K16252  DNA-directed RNA polymerase IV and V subunit 2 [EC:2.7.7.6]
Organism
itr  Ipomoea triloba (trilobed morning glory)
Pathway
itr03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:itr00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    116022049
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:itr03021]
    116022049
Enzymes [BR:itr01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     116022049
Transcription machinery [BR:itr03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol IV and V specific subunits
     116022049
SSDB
Motif
Pfam: RNA_pol_Rpb2_6 RNA_pol_Rpb2_1 RNA_pol_Rpb2_7 RNA_pol_Rpb2_4 RNA_pol_Rpb2_3 RNA_pol_Rpb2_2 RNA_pol_Rpb2_5 DUF8045
Other DBs
NCBI-GeneID: 116022049
NCBI-ProteinID: XP_031118456
LinkDB
Position
6:complement(5465597..5474159)
AA seq 1219 aa
MTTSKMREGAETSAGKEKISNGSEKMDIDFEDLEFDEEEDDEPFDAAALQEMNLNKKKLA
DFCKKVSTTFFDKYGLISHQINSYNDFIKHGIQRVFDSIGEIVVEPGYDPSKKGDNDWRY
ASIKFGKVTVSRPTFWTGGKFSEDGGEEYLQLLPRHARLQFMTYSARITVQTHLKVYTKK
RVRSDKFKTGVDQFVSNEFEMEDNRDLIIGRMPVMVNSDLCWMSDGNKKPDCEFDHGGYF
IVKGAEKTFIAQEQICLKRLWVANNPSWMVSYRPVSKRKRVYIKLTETPKVEPVVRGGEK
VLTVYFSVTEMPIWIFFFALGVSSDREVVNLIDVDTKDTEIVNILVASIHDADSKCESFR
KQPVALNFVAELMKNCRFPPQESIEDCINNFLFPSLNSFKQKARFLGYMVKCLLQAYSGK
RKADNRDDFRNKRLELASELLERELRVHLKHAERVMIKAMQRDLYGDRQLQPIEHYVDAS
IVTNGLCRAFSTGHWSHPYKRMERVSGVVANLRRTNPLQMTADMRKTRQQVSYTGKVGDA
RYPHPSHWGKVCFLSTPDGENCGLVKNLASLGLVSTNILDSFLDKLFDCGMEKLVDDSST
ILHQKHKIFLDGDWVGVCGDSGLFVLKLRRMRRRGEVPYQVEIKRDEQHHEVRIFSDAGR
ILRPLLVVENLKKIQFLKDGDSFQSFLDNGIVEFIGSEEEEDCRTAWGVNYLLEACKEDP
PAKYTHCELDLSFLMGLSCGIIPFANHDHARRVLYQSEKHSQQAIGFSTLNPNIRIDTNT
HQLYYPQRPLFRTMLSDCLGKLKDPHYHKSMLPHPEYYNGQCAIVAVNVHLGYNQEDSLV
MNRASLERGMFRSEHIRSYKAEVDNKESLGKKLKLEDAVIFGKTQSKIGRVDSLDDDGFP
FIGANLQTGDIVIGKYAESGADHSIKLKHTERGMVQKVVLSGNDEGKSFAVVSLRQVRSP
CLGDKFSSMHGQKGVLGFLESQENFPFTIQGIVPDIVINPHAFPSRQTPGQLLEAALAKV
VALGKRIGQRGEVKYATPFSTLSVDEITKNLHSLGFTRWGNERVYNGRTGEMVNSLVFMG
PTFYQRLTHMAEDKVKFRNTGPVHPLTRQPVADRKRFGGIKFGEMERDCLIAHGAAANLH
ERLFTLSDSSQMHICRKCKNMANVIQRPVLGGRKVRGPYCRFCESVEDIVKVNVPYGAKL
LCQELFSMGLALKFDTEIS
NT seq 3660 nt   +upstreamnt  +downstreamnt
atgactactagtaaaatgagagaaggagcagagactagtgctgggaaagagaagatatca
aatggatctgaaaagatggatatagattttgaagatcttgaatttgatgaagaagaagat
gatgagccatttgacgcagctgctttacaagaaatgaatttgaacaaaaagaaattagct
gatttctgcaaaaaagtatccaccacattttttgacaagtatgggctgattagtcaccag
atcaattcatacaatgacttcatcaaacatgggatccagagagtttttgattcaattggc
gaaattgtagtcgagcctggatatgatccatcaaagaagggtgataacgattggagatat
gcctcaataaaatttgggaaggtgaccgttagtcgaccaacgttttggactggaggtaag
ttttctgaagatggtggtgaagaatatttgcagttgttgccccgacatgcccgccttcag
tttatgacgtattctgccaggataacagttcagacccatcttaaggtgtatactaaaaag
cgggtccggagtgacaagtttaaaaccggagtagaccagtttgtctcaaatgaatttgag
atggaggataacagggatcttataattgggagaatgcctgtgatggtaaactctgacctc
tgctggatgagtgatggcaacaagaagcctgattgtgaatttgatcatggaggatatttc
attgtaaaaggggctgagaagacctttattgcacaggaacaaatatgcttaaaaagactc
tgggtagctaacaatccaagttggatggtttcatatcgcccagtttccaaaaggaagaga
gtatatataaagttgacagagacccccaaagtagagcctgtggtgaggggaggagaaaaa
gtcctgactgtgtatttttctgtgacagaaatgccaatttggatattcttctttgcactt
ggtgtatcctctgatagagaggtagtgaacttgattgacgtggacacgaaagacacagaa
attgtgaatatacttgttgcttccatccatgatgctgatagcaagtgcgagtcatttagg
aaacagccagtagcacttaattttgttgctgaacttatgaagaactgtagatttcctcct
caagaatctattgaagattgcatcaacaacttcctgtttcctagtcttaacagcttcaag
cagaaggctcgctttcttggatatatggtaaagtgtctcttgcaagcttattcaggcaag
cggaaagcggacaatagagatgattttaggaacaagaggttggagcttgctagtgagctg
ctagaacgagagcttagagtgcatcttaaacacgctgaaagggttatgatcaaggcaatg
caaagagatctctatggagatcgacagctacagccaattgaacattatgtggatgcatca
atagtcactaatggtctctgtagggcattttctactgggcattggtcacatccatataag
aggatggaaagggtatctggtgtagtagcaaatcttagacgaacaaacccattgcaaatg
acagctgatatgaggaaaactcgccaacaagtttcatacactgggaaagttggtgatgct
agatatccacatccttcacactggggaaaagtttgctttctctctaccccagatggagaa
aactgtgggctggtgaaaaatttggccagtttaggcctggtcagcacaaatattctggac
tcgtttctcgataaactctttgattgtggaatggagaaactggtagatgattcttcaacg
atactccatcaaaagcacaaaatatttcttgatggagattgggttggagtatgcggagat
tctggattatttgttttgaaactaaggcgtatgcggcgtaggggtgaagtgccataccag
gtggaaatcaaaagagatgaacaacaccacgaagtccgaattttttctgatgctggacga
atcctgcgcccccttcttgttgttgaaaatttaaagaaaattcaatttctgaaagatgga
gactcctttcaatcttttctggataatggaatagttgaatttattggttctgaagaagaa
gaagattgtcgaactgcttggggagtcaattacctccttgaagcctgcaaggaggatcca
cctgcaaagtatacacactgtgaacttgacttgtcattcctgatgggtttgagctgtggg
attatcccttttgccaaccatgatcatgcgaggagggtcctctaccagtctgagaagcat
agtcaacaagccattggattctctactttgaacccgaatattagaatagatactaatact
catcaactgtattatcctcagaggcctctttttcgtaccatgctgtcagattgccttgga
aagctcaaagatcctcattatcataaatcgatgctgccacaccctgaatactacaatggc
cagtgtgcaattgtggcagttaacgttcacctagggtacaaccaagaggattctttagta
atgaaccgtgcttctttggagcgtggtatgtttcggtcagagcatattagaagttacaag
gctgaggttgataataaggaatccctgggaaagaagctgaaactggaggatgctgtaatt
tttggaaaaacacaaagtaagataggacgcgttgacagccttgatgatgatggctttcca
ttcattggtgcaaaccttcaaactggtgatattgtcattggaaagtatgcggaatcaggg
gctgatcacagtattaaactgaagcatacagaaagaggcatggttcagaaggttgtactc
tctggtaatgatgagggaaaaagctttgctgttgtgtctctgagacaggttcgttctcct
tgtcttggagacaaattttctagtatgcatgggcaaaagggtgtgctaggttttctggaa
tctcaggagaactttccgtttacaatacaagggatagttccagacatagttataaatcca
catgcatttccttcacgtcaaacaccaggccaactgcttgaagctgccttggcaaaggtg
gttgccttaggaaagcgcattggccagcgaggagaagtaaaatatgcaacaccattttcc
actctatcagttgatgaaataacaaagaatcttcacagtcttggattcactagatgggga
aacgagagagtttacaatggccgaactggtgaaatggttaactccctggttttcatgggc
ccgacattctaccagaggcttacgcatatggctgaggacaaagtgaagttccgcaacact
ggcccagtccatccccttacccgccaacctgtggctgacaggaaacgctttggcggtatc
aaattcggtgagatggagcgtgactgtctcatagcacacggtgctgctgcaaacctgcac
gagcgactcttcacactcagtgattcctcccagatgcacatatgtagaaagtgcaagaac
atggccaatgtgatccaacggcccgtgcttggtggccgtaaggttaggggtccctactgt
cgtttctgtgaatcagtagaagatattgtgaaggtgaatgtgccatacggggcgaagctg
ttgtgtcaagagctcttcagtatgggcctggctttgaaattcgatactgaaatctcttaa

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