Ipomoea triloba (trilobed morning glory): 116022195
Help
Entry
116022195 CDS
T07384
Name
(RefSeq) apoptotic chromatin condensation inducer in the nucleus-like
KO
K12875
apoptotic chromatin condensation inducer in the nucleus
Organism
itr
Ipomoea triloba (trilobed morning glory)
Pathway
itr03013
Nucleocytoplasmic transport
itr03015
mRNA surveillance pathway
itr03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
itr00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
116022195
09122 Translation
03013 Nucleocytoplasmic transport
116022195
03015 mRNA surveillance pathway
116022195
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
itr03019
]
116022195
03041 Spliceosome [BR:
itr03041
]
116022195
Messenger RNA biogenesis [BR:
itr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
116022195
Spliceosome [BR:
itr03041
]
Complex C
Other components
EJC/TREX
116022195
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RSB_motif
SAP
Pinin_SDK_memA
Motif
Other DBs
NCBI-GeneID:
116022195
NCBI-ProteinID:
XP_031118657
LinkDB
All DBs
Position
6:25728643..25733960
Genome browser
AA seq
787 aa
AA seq
DB search
MSTEYPVLDNRPINKWKVTELREELKKRNLTVKGLKDELVKRLDEAIRKEREALEMEESN
GSDSESEPVLETSDAQVDHGGDKVVDDARKGGVNEVSEADDTVAKSETNDCPTDTEFAKA
TGEVPTGDSDQSIEGRKDSDTPMETITSVDVIEGAVEMASAEVVLENKVDVSIEGSSLLE
SSLDGGSIVKEDVEMKLISAEEPNFMGEEKGIEVLPNASGGITTSSKIDPENEGLKPLKM
DAEPDLSDPSTQVHEVIPNLGSQVKSDSIPSDSLPIYVTKELNDDLNADNVQLEQEIVRP
EMVPPSANKDPSGVGINHPMDDQMPSKSQGLVGGTDDDESSNVKFSMKNENADQSFVDVS
IIEHNMDNKASSSTELEVLSKDGNMNQAEFLCKEKESSEEEKLDVAASTEETKFQDNEST
DAGFSKITDMTDGENLEKINLDQSSADDSMEEDIVEIKIVDSEQISSEVGEKTEETHTKE
SGLGLEGSSTALPSNIPSDAVEVSHGDKNKILDAPEKRKFQDTAASGNKEPAKRQRKWNY
ESLKISEPKNPSISVLTPKQISRPSPGGSDSTHDVDTPKERIVPESSKTPTNSLRIDNFV
RPFTLKAVQELLGQTGKICNFWMDHIKTHCYVKFSSVEEAIETRNAVYNLRWPTNGGRLL
LADFVDPQEVISRLEGPSKPTTPTASASPAVPPVQTPSQPSPLARQQAPREQVERPHPLS
RQPPTSDRPAMKERLARPPSPVADKMEAPIVTLDDLFRKTKATPRIYYLPLTDEQVSRKL
NEQGRNK
NT seq
2364 nt
NT seq
+upstream
nt +downstream
nt
atgtctacagaatatcctgtgcttgataaccgaccaattaacaagtggaaggtaactgag
ttgagggaagagcttaagaagcggaacttaacagtaaaggggttgaaggatgagttggtg
aaaagattggatgaagcgattcggaaggaaagggaagcccttgagatggaagagagcaac
ggttctgatagtgagagtgagcctgtacttgagacctctgatgctcaggtagaccatggt
ggtgataaagttgttgatgatgctaggaagggcggtgttaatgaagttagtgaagcagat
gatactgttgctaaaagtgagaccaatgattgccctactgatacagaatttgcaaaagcc
acaggcgaggtaccaactggcgattctgatcagtctattgaaggaagaaaagattcagat
acccctatggaaaccataacttcagttgatgttattgagggtgctgttgagatggcttca
gctgaggtggtgctagaaaacaaggttgatgtatcaatagaagggtccagtctgttagag
tcttctttagatggcggcagtattgtgaaggaggatgtagaaatgaaattaatttctgct
gaggaacctaattttatgggagaagaaaagggtattgaggtgctacctaatgcatctggg
ggaatcactacaagcagcaaaattgatcctgaaaatgagggattaaaacctttgaagatg
gatgctgaacctgatttgtccgacccaagcacccaggtacatgaggtcatccctaattta
gggtctcaagtaaaatctgactcaattcctagtgattctttgcccatttatgtaacaaaa
gaacttaatgatgatttgaatgctgataatgtccaattagaacaagaaattgttaggcct
gagatggttcctccatcagccaacaaagacccctctggcgttggcattaatcatccaatg
gatgatcaaatgccaagcaagagtcaaggtcttgttggaggaactgatgatgacgagtcc
tcaaatgtgaaatttagcatgaaaaatgaaaatgcagaccaatcctttgtagatgtttcc
attatagaacataacatggataataaggcttcaagtagtactgagctggaagtgctgtca
aaagatggaaatatgaatcaagctgagtttttatgtaaagagaaagaatcatctgaagaa
gaaaaacttgatgttgctgcttctaccgaggaaaccaaatttcaagacaatgaatctaca
gatgctggttttagtaagattactgatatgacagatggagaaaatcttgaaaaaataaac
ctcgaccaatcttcagcagatgattccatggaggaggacatagtagaaataaagattgta
gattctgaacagatctcctctgaagtgggtgaaaagactgaagaaactcatactaaggaa
tctggattggggttggaaggtagtagtactgctttgccgtctaacattccttctgatgca
gttgaagtttctcatggagataagaataagattcttgatgcacctgaaaagagaaaattt
caagacacagctgcatcgggaaacaaggaacctgccaaaaggcagcgcaaatggaattat
gagtctctaaagatatctgaaccaaaaaatcccagtatctcggttctcacaccgaagcaa
atctcaaggccttcccctggtggcagtgactctacgcatgatgtagatactcccaaggag
cggattgttccagagtcttcaaaaacacccaccaattctctcagaattgataactttgtg
cggccgtttacactgaaagctgtacaagagctcctaggtcaaaccggaaagatctgcaat
ttctggatggaccacatcaagacccattgctatgtcaagttttcttctgtcgaggaagcc
atagagactcgaaatgctgtgtacaatcttcggtggcctacaaatggagggcgcctcctg
cttgcagattttgttgatccacaggaagtaatctcgcgtttagagggcccttccaagcca
accactcctacagcgagtgccagcccagcagtccctccggtccaaactccatcccagccc
tcaccactagccaggcagcaagctccccgggagcaagttgagcgccctcatccactctcc
cgccaaccacctacttctgatcgacctgcaatgaaagagcggcttgctagaccaccttcc
cctgttgctgacaaaatggaagcccccatcgtcactttggacgacctgttcaggaaaaca
aaagccacccctcggatatactatctacccctgacagacgagcaagtatccagaaagctg
aacgaacaaggaaggaacaagtag
DBGET
integrated database retrieval system
