Ipomoea triloba (trilobed morning glory): 116022218
Help
Entry
116022218 CDS
T07384
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein 1-like
KO
K14411
RNA-binding protein Musashi
Organism
itr
Ipomoea triloba (trilobed morning glory)
Pathway
itr03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
itr00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
116022218
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
itr03019
]
116022218
Messenger RNA biogenesis [BR:
itr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
116022218
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_PARP14_3
Motif
Other DBs
NCBI-GeneID:
116022218
NCBI-ProteinID:
XP_031118690
LinkDB
All DBs
Position
6:15630645..15634256
Genome browser
AA seq
466 aa
AA seq
DB search
MEPGKLFVGGISWDTNEDGLREYFQTFGEIVEAVIMKDRTTGRARGFGFVVFADPSVAER
VVKEKHMIDGRTVEAKKAVPRDDHHGNRNSGVMQSSPGSIRTKKIFVGGLASSVTESDFK
RYFDQFGTITDVVVMYDHNTQRPRGFGFITYDSEEAVDKVLYKTFHELNGKMVEVKRAVP
KELSPGPIRSPLGPYNFGLNRVQNLLSPYNQGYSPSSIGSYGVRMDRTNPTAIGLNRYSS
FNPSSYSMGLLDSTLNSNNGGGGNFSPNLGYGRIYGGNSARLNGLMGYASGRIGSGSMLN
STVQNMLDNDTLNYTTQSANYNNFVGLGSGNTGFSAAAFGGLETIWDSSIISGQGGRNGS
PGNDLIGYNNAGVGGYGPYNGNTAGETSTLTATGDVRSANFGSLYGTGNGSFFEDQTWHS
LSPELEGSGSFRYGLGSMASDVIPKNSLDYVNAYSITNRSNTGIAA
NT seq
1401 nt
NT seq
+upstream
nt +downstream
nt
atggagcctggaaaattatttgttggtggaatttcttgggacaccaatgaagatggtctc
cgagagtatttccaaacatttggtgaaatagttgaggcagtgatcatgaaagatcgaacc
actggtcgtgcccgtggttttggttttgtcgttttcgctgatccttctgttgctgaaaga
gttgtcaaggaaaaacacatgatcgatggaagaacagtagaggcaaagaaggctgtacct
agggatgaccaccatgggaacagaaatagtggagttatgcagtcttcaccaggttccatt
cgcacaaagaagatttttgtgggaggtttggcatcttcagttactgagagtgatttcaag
aggtactttgatcaatttgggacaatcacggatgtcgtggtgatgtatgaccacaacaca
caaaggcctaggggatttggatttattacttacgactcggaggaagcagtggataaagtt
ttgtacaaaacatttcatgaacttaatggcaaaatggttgaggtaaagcgagctgttcct
aaggagctatctccagggccaatccgaagtccattaggaccatataactttggcttgaac
agagtacaaaatctcctcagtccttacaatcaaggttacagtccaagttcaattggaagt
tatggagtacgaatggatagaactaatccaactgccattggccttaacagatattcttca
tttaatccttccagctactcaatgggacttttagactcaacactgaattcaaataatggg
ggaggtgggaactttagtcctaaccttggatatggacgtatttatggtgggaattcagcc
aggctaaatggtctaatgggatatgcctctgggaggattggaagtggttctatgttgaat
tcgacagttcagaacatgttggacaatgacactcttaattatactacgcagtccgctaat
tataacaattttgtcggcttaggaagtggcaatactggattctctgctgctgcttttgga
ggccttgaaacaatttgggattcgtctattatttcaggtcaaggtggaaggaatggttct
cctgggaatgaccttatcggctacaacaatgctggtgttggagggtatggaccgtataat
ggtaacactgctggtgaaacatccactcttactgcaacaggagatgttcgttctgcaaat
tttggaagcttgtacgggactggaaacggttcgttctttgaggaccaaacctggcattca
ttatctcccgagctggagggttctggttctttccgctatgggcttggaagtatggcttca
gatgttatacctaaaaactcacttgattatgttaatgcttatagtattacaaatagatca
aatacaggaattgctgcctag
DBGET
integrated database retrieval system
