Ipomoea triloba (trilobed morning glory): 116022259
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Entry
116022259 CDS
T07384
Name
(RefSeq) uncharacterized protein LOC116022259
KO
K18195
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
itr
Ipomoea triloba (trilobed morning glory)
Brite
KEGG Orthology (KO) [BR:
itr00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
116022259
Enzymes [BR:
itr01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
116022259
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GFIT
Motif
Pfam:
Rhamnogal_lyase
CBM-like
fn3_3
CarboxypepD_reg
Motif
Other DBs
NCBI-GeneID:
116022259
NCBI-ProteinID:
XP_031118751
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Position
6:24974654..24979185
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AA seq
641 aa
AA seq
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MSPIGVRLYIQDRHVMMDNGIVQVTISNPEGIVTGIRYNDIDNLLEVLNDESNRGYWDVV
WNATDTGKSGIFEVIKATKFSVIMETEEQVEVSFSRPWDPSLQGKFVPLNIDKRFILLRG
ISGFYSYAIYEHVGSPEWPAFSLGETRIAFKLRKDKFHYMAMADNRQRFMPLPDDRSTGR
GQALAYPEAVLLVNPVEPELKGEVDDKYQYSCDNKDNKVHGWISTNPPVGFWQITPSNEF
RTGGPLKQNLTSHVGPTTLAMFLSAHYTGDELSPKFAQGEAWKKVFGPVFIYLNSAMEAE
DALTLWDDAKQQMLIEVQSWPYSFPASEDFPSADKRGNVSGRLLISDKYISDDLIPANGA
YVGLAPPGDAGSWQRECKDYQFWSTADEDGYFSINNIRPGDYNMYAWVPGFIGDYRNEAA
ITITSGGIIDMGDMVYEPPRAGPTLWEIGVPDRTAAEFYAPDPNPKYINKLYVNHPDRFR
QYGLWERYSELYPDGDLVFTVGESDYTKDWFYAQVTRKKNDKTYQGTTWQIKFKLDNVNH
DGVYKLRVAIASSTFAELQVRVNDPSSNKPVFSSGLIGRDNSIARHGIHGLYWLYNVDIQ
GSLLVEGDNNVIYLTQPRNQSPFQGIMYDYIRLEAPPTMPK
NT seq
1926 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcccatcggagtccggttgtacatacaagatcgccatgtgatgatggataatggc
atagttcaagtcacaatatcaaatccagaggggattgtcactggcatacgctataatgat
attgacaatcttcttgaagtcctcaatgatgaatctaacagagggtactgggatgtggtc
tggaatgccacagacactgggaaatctggaatctttgaagtgatcaaagccacaaagttt
agtgttataatggaaacagaagaacaggtggaagtatcattctcaaggccatgggatccc
tccctgcagggaaagtttgttccactgaacatagataaaaggtttattttgcttcgcggg
atttctggtttctactcctatgccatttatgagcacgtcggttcgccagagtggcctgca
tttagccttggggaaaccaggattgcattcaagctcaggaaagacaagtttcactacatg
gctatggctgacaataggcaaagattcatgccattgccggatgacagatcaacagggaga
ggccaggcccttgcctacccggaagcagtcctacttgtcaaccctgttgagcctgaactt
aaaggagaggttgatgacaagtaccaatattcatgtgataacaaggataacaaagtccac
ggatggatatcaactaatcctccagtaggtttctggcaaatcacgcccagtaatgagttc
cgaactggtggacccctgaaacagaatctcacttcgcacgtcggtcccacaaccttggcg
atgtttcttagtgctcattacaccggcgatgagctatcaccgaaattcgcccaaggcgag
gcctggaagaaagtttttggccctgttttcatctacctcaactctgcaatggaagctgaa
gatgcactcacgttatgggatgatgccaaacagcagatgctgattgaagtccaaagctgg
ccgtacagctttccagcatcagaggatttcccatcagcagacaagcgtggaaatgtcagt
ggcagactattaatcagcgacaagtacatctctgatgatcttattccggctaatggtgcg
tatgtggggttggctccacctggggatgctggatcttggcaaagagaatgcaaggactat
caattttggagcactgcagatgaggatggctacttctccatcaacaatatacgccccggc
gactataatatgtatgcttgggtccctggattcatcggagattatcggaacgaagccgcc
ataaccataacttcaggcggtattattgatatgggtgacatggtttatgagcctccgagg
gcaggaccgaccctgtgggagatcggcgttcctgatcgcactgctgctgaattctacgct
cctgatcccaaccccaagtatataaacaagctctatgttaaccaccctgacaggtttaga
caatacggattatgggaacgatactcggaattgtatccggacggggacctagtgttcact
gtaggtgagagcgattatacaaaagattggttttacgctcaagtcacaaggaaaaaaaat
gacaaaacttatcagggaactacatggcaaatcaaatttaaactcgataatgtcaaccat
gatggcgtatacaaattgcgtgtggcaattgcctcatcaactttcgctgaactacaggtt
agggttaatgatccaagctcaaacaagccagtatttagcagtggattgatagggagggat
aactcaattgctaggcatggaatacatgggctatactggctgtacaatgtggatatacag
ggaagtctgcttgttgagggggataataatgtcatttacttgactcagcccaggaatcag
agtccatttcaaggaattatgtatgactatattcgcttagaagctcctcctactatgcct
aaatga
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