Ipomoea triloba (trilobed morning glory): 116022270
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Entry
116022270 CDS
T07384
Name
(RefSeq) ATP-dependent DNA helicase At3g02060, chloroplastic
Organism
itr
Ipomoea triloba (trilobed morning glory)
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Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CarD_TRCF_RID
TRCF
Cas3-like_C_2
T1R_D3-like
RecG_dom3_C
DUF924
Motif
Other DBs
NCBI-GeneID:
116022270
NCBI-ProteinID:
XP_031118761
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Position
6:9213715..9230215
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AA seq
838 aa
AA seq
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MAAAKVSIFSHDGTPIPSTRRRVRKLERSRILPLNFPHSYCTTRFCVSQALNADLVYTKS
TRSRTRPQEAADAELDAISVLNHRIRRDLAKRDQLSITRPVMDADEADKYLQLVKEQQQR
GLQKLKAGRARTVDNSATATPSTKDQVFSYKVDPYTLRSGDYVVHKKVGVGRFVGIKFDV
SKDSSIPIEYVFIEYSDGMAKLPVKQASRMLYRYNLPNESKKPQALSKLSDPSAWERRRL
KGKIAVQKMVVDLMELYLHRLKQKRPLYPKTAALAEFASQFPYEPTPDQKQAFLDVERDL
TERENPMDRLICGDVGFGKTEVALRAIFCVVSAAKQVMVLAPTIVLAKQHFDVISDRFSR
YPHITVGLLSRFQTKSEKEEYLHMIKHGHLDIIVGTHALLGSRVEYNKLGLLVVDEEQRF
GVKQKEKIASFKTSVDVLTLSATPIPRTLYLALTGFRDASLISTPPPERVPIKTHLSAYM
KEKVISAIKFELDRGGQVFYVLPWIKGLEDVMEFLEEVFSHVEIAIAHGKQYSKQLEETM
ERFARGDIKILICTNIVESGLDIQNANTIIVQDVQQFGLAQLYQLRGRVGRADKEAHAYL
FYPDKSLLSQQALERLAALEECCHLGQGFQLAERDMAIRGFGNIFGEQQTGDVGNVGIDL
FFEMLFESLSKVDEHRVISVPYHSVKLDIDVNLHLPSEYINHLENPMEIISEAEKGAEKD
MWNLMQFTENLRRQYGKEPYSMEILLKKLYVRRMAADLGITRIYALGKIVGMKTNMTKNV
FKLITESVASDVHRNSLTFEDGEIKAELLLELPREQLLNWVFQCLAELYASLPALIKY
NT seq
2517 nt
NT seq
+upstream
nt +downstream
nt
atggccgccgcaaaagtctccattttctcccacgacggcactcctattccttccactcgt
cgccgtgttcgtaaactggagcgcagtcgcattcttcctcttaatttcccgcattcttat
tgcacaacccggttttgtgtctcccaggccttaaatgcggacctagtgtataccaaatcc
acgcggagtcgcactcggccgcaggaggctgctgatgcggagcttgacgccatttctgtg
ctaaaccacagaatccgccgcgaccttgccaagagggaccaattatccatcactaggccc
gtcatggacgcggatgaggctgataagtatcttcagcttgtcaaggagcagcagcaaagg
ggccttcagaagctcaaggccggcagagctagaaccgttgacaattctgccactgccacg
ccctcaactaaggatcaggttttcagttataaggtcgatccttacaccctccgctccggc
gattacgtcgtccacaagaaggtcggcgtcggacgttttgttggcattaaatttgatgtc
tctaaggattcttctatccctattgagtatgtttttatcgagtactccgatggaatggct
aagttacctgttaaacaggcatctcgaatgctctatcgctacaatctcccaaatgaaagc
aaaaagcctcaggctttaagcaaattaagtgatcccagtgcatgggagaggagaaggttg
aagggaaaaattgcagtccagaaaatggttgtggatttgatggagttatatttacatagg
ctaaaacaaaaaagacctctttatccaaagactgctgctctggctgaatttgcatctcaa
tttccttatgagcccacaccagatcagaaacaggctttcttagatgttgaaagggacttg
acagagagagaaaatccaatggacagattaatttgtggcgatgttggttttggtaaaact
gaagttgcattgcgtgctatcttttgtgtagtctcagcagccaagcaagttatggttcta
gcaccaactatagttttagccaaacaacactttgatgtaatctcagacaggttctcaaga
tatcctcatatcacagttggacttttaagcagatttcagactaaatcagagaaggaggag
tacttgcacatgattaaacatgggcatctggacattattgtagggactcatgcactactt
ggcagtcgggttgagtacaataagctaggccttcttgtggttgatgaggaacagaggttt
ggtgttaaacaaaaggagaagattgcttcatttaaaacttcagttgatgtcctcacactt
tcagcaactcctattccgcgcacactttatttagcgctaactggctttcgtgatgctagt
ttgatttcaacaccacctcctgagagagtcccaatcaaaacacatctttcggcttacatg
aaagaaaaagtaatatcagcaatcaagtttgaactcgaccgtggtggccaagtattttat
gttttgccctggattaaggggcttgaggatgttatggaatttcttgaagaagtattctca
catgttgaaatagctattgctcatggaaagcaatattccaagcagcttgaggaaaccatg
gaaagatttgcacgaggagatataaagattctaatatgcacaaatatagtagaaagtggg
cttgacattcaaaatgctaacacaatcatagttcaagatgttcaacaattcggcctcgcg
caactatatcagctgcgtggaagggtgggccgggcagacaaggaagctcatgcatactta
ttttaccctgataagtcactactatctcagcaagcacttgagaggcttgctgctcttgaa
gagtgttgtcatcttggccaaggttttcaacttgctgaaagagacatggctataagaggt
tttggtaatatttttggtgagcaacagacaggtgatgttgggaatgtgggcattgatctc
ttctttgaaatgctatttgaaagcttgtccaaggttgatgaacatcgtgtaatttcagtt
ccgtaccattcagtaaagcttgatattgatgtaaacctgcatcttccttctgagtacata
aatcatttggagaaccccatggaaataattagtgaagctgagaaaggagctgaaaaagac
atgtggaacttgatgcagtttacggagaatctaaggcgccagtatgggaaagaaccttac
tccatggaaatcctcttgaagaagctttatgtgaggagaatggcagcagatttgggaatt
acgagaatatatgctttaggaaagatagttggcatgaaaacaaacatgacgaagaatgtt
ttcaagctgataacagagtcagtagcatcagatgttcatcggaattctctcacttttgag
gatggtgaaataaaggctgaactgcttttggagctaccaagagagcagttgcttaattgg
gtgtttcaatgcctagctgaattgtatgcttcattaccagccttaataaagtattag
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