Ipomoea triloba (trilobed morning glory): 116022294
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Entry
116022294 CDS
T07384
Name
(RefSeq) RRP12-like protein
KO
K14794
ribosomal RNA-processing protein 12
Organism
itr
Ipomoea triloba (trilobed morning glory)
Brite
KEGG Orthology (KO) [BR:
itr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
itr03009
]
116022294
Ribosome biogenesis [BR:
itr03009
]
Eukaryotic type
90S particles
Other 90S particles
116022294
Pre-60S particles
Other pre-60S particles
116022294
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRP12_HEAT
TOR1L1_N
Hemerythrin
HalD
Motif
Other DBs
NCBI-GeneID:
116022294
NCBI-ProteinID:
XP_031118791
LinkDB
All DBs
Position
6:21309836..21317623
Genome browser
AA seq
1278 aa
AA seq
DB search
MEGSDMEFVPAETLDSKADDFCAAVLSQFSDSGNESHVHICTAIGAMSQELKDQNLPLTP
ITYFGATCSSLQRVSTAEAEDPQPHLVDALSTILSLVIDKISRAALLKKFDYTSNLLARI
LRQKTTGVQGILSCLKGVSYLLLVREKANWADVAELYGFLVGFVADDRPKVRKQSHICLR
EVLQKFQMSPMLTALLVPASEAIGNVFERSLLLAGGSNASAPEGPKGAQEVLYILDALKI
CLPFMSVKSSVSILKYFKSLLELRQPLVTRRITDGINALCIHPTGEVSPEVLLDLLCSLA
TSISAHESSADSMTFTSRLLDVGMKRIYSLNRQICVVKLPVVFSALSDVLVSEHEEALVA
AKEAFKNLINTCIDENLIKQGVDQVMSSNEGTRKSAPTIIEKVCATIESLLDYQYAAVWD
ISFQIVSTMFDKLGQYSSYFLKGALKNLAEIQKLPDEDFPFRKQLHECVGSAIGAMGPEA
FLSILPLNLDSRDLSEANLWLFPILKHYIVGAHLSFFTKTIMSIIAAMKQRSAVFEQEGK
IISARTIDGIVYSLWSLLPSFCNYPLDTADSFKALEKVLSKALREEPDVHGIICSGLHIL
IEQNKSIVEGKEDLSNSGMSIHKEQAIARYNSQVAADNLNALRVSARELLSVLSGAFLKS
SKDTIGPLQTVIGELASISDKEVVTRFFKSTMQKLLKVTQEAGRTGSRDNNAMQVDNSSG
EESLSSVRAQLFDLAVSLLPGLDSKEIDLLFIAIEPALKDTEGLVQKRAYKVLSIMLQKS
DEFTSRRLDELLNLMFEALPSCHFSAKRHRLDCLYFLIAHISKDNSVQRRSDLVASFLTE
ILLALKEANKRTRNRAYDILVQIGHACADEERGGKKEHLEQFFNMVAGGLAGETPHMISA
AMKGLARLAYEFTDLVAASYNVLPSAFLLLRRKNKEIIKANLGLLKVLVAKSQAEGLQAH
LRGMVEGLLNWQDSTKNHFKAKIKLLLEMLVKKCGLDAVKEVMPEEHMKLLTNIRKIKER
REKKFNDNSSEESKSRMSKATTSRLSQWNHTKVFSDFGDDETEDSEAECMDTKTISGRQS
RADAHSLRSKKTRKSSRSLQEDLFDQLDDEPLDLLDQQKTRLALRSSGNNKRKAESDDEM
EIDAEGHLIIREEDGKPKRKKSLDSEADARSEAGSRSSMNSRKTQAQKRRKTSDAGWAYT
GNEYSSKKASGDVKRKGKLEPYAYWPLDRKMMSRRPEQRAAARKGMSSVVKMTKKLEGKS
VANALKMKGAKGSKKKVK
NT seq
3837 nt
NT seq
+upstream
nt +downstream
nt
atggagggctctgatatggaatttgtaccggcagaaaccctagactccaaagccgatgac
ttctgcgctgccgtgttatcccaattcagcgattccggcaacgagtctcacgtccacata
tgcaccgccatcggcgcaatgtcacaggagctaaaagatcaaaacttgccactcaccccc
ataacctacttcggcgctacttgctcatcccttcagcgcgtctccaccgccgaagccgag
gacccccagcctcacctcgttgacgctctctccaccattctctcactcgtcattgataaa
atcagcagagccgcgctgctaaagaaattcgattatacttcgaatctcctcgcccggatt
ctccgacagaaaaccactggtgttcaggggattctctcgtgtttgaagggcgtttcgtat
ctcttgcttgttagagaaaaggccaactgggcggatgtagctgagctctatggttttctt
gttggttttgtggcggatgatcgaccaaaagtgaggaaacagtctcacatttgtcttcga
gaggtcctacaaaagtttcagatgtcacctatgctcacagctttattggtacctgcaagt
gaagctattggtaatgtctttgaaaggtctctcctacttgctggaggatcaaatgcaagt
gctccggagggcccgaaaggagctcaggaagttctgtacattcttgatgcactcaaaatt
tgtctcccatttatgtccgtgaagtcgtcagtgagcattttgaaatacttcaaatctcta
ttggaattgcgtcaacctcttgttaccaggcgtataacagatggcattaatgccctctgt
atccacccaactggagaagtttccccggaagtgcttcttgatctgttatgctcattagcc
acatcaatttctgcacatgagtcatcagctgatagcatgacatttacttctcgcttgcta
gatgttgggatgaaaagaatatattccctaaatagacaaatttgcgtggttaagctccca
gtggtattcagcgcacttagtgatgttttggtttctgaacatgaggaagcattggtagct
gcaaaggaagctttcaagaacttaataaacacatgcattgatgaaaacctgatcaaacaa
ggtgtggatcaggttatgagttctaatgagggaacaaggaaatcagccccaacaattatt
gaaaaagtatgcgcaacaattgaaagcttgcttgattatcaatatgcggcagtctgggat
atttcgtttcaaattgtttcaacaatgtttgacaaactaggtcaatattcttcttacttc
ttgaaaggagcacttaagaatttggccgagatacaaaagttacctgatgaagattttcca
tttcgcaaacagctacatgaatgtgtgggatcggctattggtgcaatgggacctgaagct
tttttaagtattcttcctctgaatttggactctcgggatttatccgaggccaatctgtgg
ctgtttccgatcctgaaacattacattgttggtgctcatttaagtttctttaccaagaca
attatgtcaattattgcagctatgaagcagcgatctgcagtgtttgagcaagaaggaaag
atcatctctgcgaggactattgacggcatcgtatactctttatggtcattgttaccctca
ttttgcaactatcctttagacactgctgatagcttcaaggccttggagaaggtgctaagt
aaagctttacgtgaagagcctgatgttcatggtataatatgctccggtttgcatattctc
attgaacagaacaagagcattgtggaaggaaaagaggatctgtctaacagtgggatgagc
attcacaaggagcaagcaattgctcgttacaactcacaagttgcagctgataatttgaat
gcattaagggtctctgctcgtgaattattatctgttctttctggagccttcttgaaatct
tcgaaagacacgattggacctctgcagacggttattggtgagctggcttccatttcggat
aaagaggtagtcacaaggttcttcaagagtactatgcaaaaacttttgaaggtgacacaa
gaggctggtagaacaggctcaagagataacaatgcaatgcaagtggataactcttctggc
gaagaatcattgtcgtcagtgagggctcagctatttgatctggcagtttcacttttgcct
ggcttagactccaaggaaattgatctcttgttcatcgcaatagaacctgcattgaaggat
actgaaggattggttcagaaaagggcatacaaagttctttcaatcatgctccaaaaatct
gacgagtttacttcaaggaggcttgatgagttgcttaatttgatgtttgaagcactgcca
tcatgccatttttctgccaagcgtcatagacttgactgcctgtatttcttgattgcccat
atttccaaggataactcagtacagaggaggagtgaccttgttgcttcgtttttaaccgaa
attctacttgccttaaaagaggctaacaaaaggacgcggaacagggcatatgatattctg
gtccagattggccatgcttgtgccgatgaagagagaggtggcaaaaaggagcacttagag
cagttttttaacatggtcgctggtggccttgctggggagacccctcacatgattagtgcg
gcaatgaaaggtttagctcggttggcctatgaattcactgatcttgtcgctgcttcgtac
aatgtccttccatctgcatttctccttcttaggagaaagaacaaagaaataattaaggct
aatttagggctcttgaaggtcttagtggccaaatcacaagcggaaggattgcaggctcat
ttaagaggcatggtggaaggcctcctaaattggcaagatagtactaagaaccattttaaa
gctaagattaagctgctacttgaaatgctcgtcaagaagtgtggcctggatgctgtaaag
gaagtgatgcccgaggagcacatgaagctcctcactaacataagaaagattaaggagagg
agagaaaagaagttcaatgacaactcttcggaggaaagtaaatctcgcatgtcaaaagca
acaacatccaggcttagtcaatggaatcatacaaaagttttttctgattttggtgatgat
gaaactgaggatagtgaagcagagtgtatggatacgaagaccatttctggccgacaaagt
agggccgatgcacattcattacggtctaagaaaacgcgtaaatcatccaggagcttgcaa
gaggatttgtttgatcaattagacgatgagccactcgacttacttgaccaacagaagacg
aggttagctcttagatcctctggaaataacaagcgcaaggcagaatctgacgatgagatg
gagatagatgccgaggggcatcttatcattcgtgaggaagatgggaagccaaaaagaaag
aagtcgcttgacagcgaggcagatgcaagaagtgaagctggcagtcgctcgtcaatgaac
tcaagaaaaacccaagcgcagaagcgaaggaaaacatcagatgctggatgggcttacaca
ggaaacgaatactcaagcaagaaagcaagtggcgacgtgaaacgcaagggaaaactcgag
ccatacgcctactggccccttgaccgcaagatgatgagccgcaggccagaacaacgcgct
gctgcaagaaaaggcatgtcgagtgtggtgaagatgacgaagaagttggaggggaagagc
gttgctaacgcacttaaaatgaaaggagcaaaaggaagcaaaaagaaagttaaataa
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