Ipomoea triloba (trilobed morning glory): 116022300
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Entry
116022300 CDS
T07384
Name
(RefSeq) pumilio homolog 5-like
KO
K17943
pumilio RNA-binding family
Organism
itr
Ipomoea triloba (trilobed morning glory)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PUF
PUF_NOP9
DUF445
DRE2_N
Motif
Other DBs
NCBI-GeneID:
116022300
NCBI-ProteinID:
XP_031118798
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All DBs
Position
6:21144920..21151896
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AA seq
987 aa
AA seq
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MTTEIPMRILESGRPGEWFSSKDALPHVNSINDMAVDKLGLLLEGHTIQGDNGGKVPNRC
GSAPPSMEGSFLAFQNLICQKRGGRNVGSASFDSTLLNCQSLEQIHADPSSFAYHCSNAN
LNPRFHPPINSRENRHLDNYKFSSSDDGGDGSLHLHRSSLSTHTEEPEDDNSPSNAADNW
AQNSTAELPVHKLGNLAGQDKSLDDITQGGFPRTPSPVFSQSPSSNLVAVDKPTVCDIEN
NLSIGISESPETGSDVCTEGSVGHGASSSNDASPVPFEEMFYVDVLGTPYTQLNNEEASS
SPCLGGELTEGSTVADVYKKHAMVEREKIKDSESSNEKNVPESQHYYSWQNTAYHATGPQ
VQIPGHGHPRFSSVEVPVVQQTSGLVPPLYATAAAYMASGNQFYSSVNSFGVYPPQYNMG
GYAAGSEFLPAYATGYPSHSGLPVHVDATAAQIISDQSTGLSTKESIPHVGDFQQINKFY
GHQGLMLHPFIDPFQIPYFQHSVEDAFHLSGQYVNFPSTSVVGSQVNSYTLQKDPTLSYR
FGDQNFQPTPSANFSVPTPRKREAPKNSYYGSPTSPGVVPQFPVPPLGSPILPGSPVGGA
SPFGWRNETRFSQGSGRNLGVYSGWQGQRGSNGVNDPKKYFLEDLKASNSRKIGLSDIAG
RIAEFSVDQHGSRFIQQKLENCSIEDKVSVFREVLPLASKLITDVFGNYVIQKFFEYGTH
EQRKELASQLSGQILPLSLQMYGCRVIQKALEVIDLDQKTELMHELDGHVMKCVWDQNGN
HVIQKCIECVPTEKIGFILSSFQGQVAMLSTHPYGCRVIQRVLEHCSNDSQSQCIVDEIL
ESAYDLAQDQYGNYVTQHVLQRARPRERLQIIDKLAGKVVQLSQHKYASNVVEKCLEHGD
SAERELLIEEILAQSEGNDGLLTMMKDQFANYVVQKILEISNDKQRATLLNRIKVHLQSL
RKYTYGKHIVARFEQLSGKETEAETNL
NT seq
2964 nt
NT seq
+upstream
nt +downstream
nt
atgacaactgaaattcctatgaggatactggaaagtggtagacctggggaatggttttct
tccaaggatgctctgccacatgtaaactcaataaatgacatggcagtcgataagttgggg
ttgcttttagaagggcatacaattcaaggtgataacggaggcaaggttccaaatcgctgt
ggaagtgcacctccaagtatggaaggctcgtttctggcctttcagaacctgatatgtcag
aaaaggggaggtcggaatgtaggctctgcgagctttgacagtactctgctaaactgccaa
tcccttgaacaaattcatgctgacccatcctcttttgcataccattgctcaaatgccaac
ctgaatcctaggtttcatcctcctataaactcaagggagaacagacatcttgataactac
aaattcagttcttctgatgacggtggtgatggatcattgcacttgcatagaagctctctt
tcaactcatactgaagagccagaagatgataattcaccttcgaatgctgcagataattgg
gcacaaaatagtactgcagaactgcctgtacataaactaggtaatttggcaggtcaagac
aaaagcttggatgatataactcagggaggtttcccacgcactccatcaccggtctttagc
caatctccttcttcaaaccttgttgcagtggacaaaccaactgtatgtgatattgaaaac
aatctttctattggtatttctgagtcgcccgagacaggttcagatgtttgcactgaaggc
tcagtcgggcatggtgcatcttcgtctaatgatgcttcacctgtcccttttgaagagatg
ttttatgtagatgtgttagggacaccgtatacccaacttaacaatgaagaagcaagtagt
agcccatgcttgggaggtgaacttacagaaggaagcacagtagcagatgtttacaagaaa
cacgcaatggtggagagagagaaaattaaggacagtgaaagttccaatgaaaaaaatgta
ccagagtcacagcattattattcgtggcagaacacagcttaccatgctactggcccacaa
gttcaaatacctggtcatggtcatcctaggttctcctcggttgaggtaccagtagtacaa
caaacttctggactggtacctcctttatatgcaacagctgcagcctatatggcttcagga
aaccaattttattctagtgtgaactcatttggcgtatatcctcctcaatacaacatgggg
ggttatgccgctggttctgaatttcttccagcctatgccactggatatccatctcatagt
ggtctgcctgtgcatgttgatgccactgctgcgcaaatcattagtgatcaatctactggt
ctttcgactaaggaaagcattccacacgtaggggatttccagcaaataaacaagttttat
ggtcaccagggattaatgttgcatcctttcattgatcctttccaaatcccgtacttccag
cattctgttgaagatgcattccatctttctgggcaatatgttaattttccatcaacaagt
gtggtaggaagccaagtcaattcttacactttacagaaagaccccactctttcttatcgc
tttggtgatcagaattttcagcctactcctagtgcaaatttttctgtaccaactccaagg
aaaagggaagcaccaaaaaatagttactatggaagtcccactagtcctggggttgtgcca
cagtttccagtaccccctctgggcagtcccattttgccaggatccccagttggaggggca
agtccttttggatggaggaatgaaacaagattctctcaaggttctggtagaaaccttggt
gtttactctggatggcaaggacaaagaggatctaatggagtcaatgatcctaaaaagtat
tttcttgaagatctaaaagcaagcaacagtaggaaaattggtctctctgatattgcgggt
cgaattgccgagtttagtgttgatcagcatgggagccgattcatacagcagaagttggaa
aactgtagtattgaagataaggtatctgttttcagagaagttcttccacttgcttcaaag
ctgatcactgatgtttttgggaactacgttattcagaagttctttgaatatgggactcat
gagcaaaggaaggagctggctagtcaattatctgggcagatattacctttaagtttgcaa
atgtatggttgccgtgttatccaaaaggcccttgaagttattgatcttgaccagaaaaca
gaacttatgcatgaactcgacgggcatgtaatgaaatgtgtatgggaccagaatggaaat
catgtaatacaaaaatgcatcgaatgtgttccaacagaaaaaattggttttattttatct
tctttccaaggccaagttgctatgctgtctacccatccctatggttgtcgtgtgatccag
agagttttagagcattgttcaaatgactcgcaaagtcaatgtatagtggatgaaatcttg
gaatcagcgtatgatcttgctcaggatcagtatggaaactatgtcacccagcatgttttg
caaagggcacgaccacgtgaaaggcttcagattattgacaagctggccgggaaagttgta
cagttgagtcagcataaatatgcttccaacgttgtcgagaagtgtttggaacatggcgat
tctgctgaacgcgagctcttgatcgaggagattcttgctcaatctgagggaaacgacggt
ttgctgacgatgatgaaggatcagtttgcaaactacgtggttcagaagattctcgaaatc
agcaacgataaacaacgagcaacattgctgaatcgtatcaaggttcatcttcaatctctg
aggaaatacacctatggtaaacacatagtggctagatttgaacagctttctgggaaagaa
acagaagctgaaacaaacctgtga
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