Ipomoea triloba (trilobed morning glory): 116022333
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Entry
116022333 CDS
T07384
Name
(RefSeq) cell division cycle protein 48 homolog
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
itr
Ipomoea triloba (trilobed morning glory)
Pathway
itr04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
itr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
116022333
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
itr03019
]
116022333
03009 Ribosome biogenesis [BR:
itr03009
]
116022333
04131 Membrane trafficking [BR:
itr04131
]
116022333
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
itr04147
]
116022333
Messenger RNA biogenesis [BR:
itr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
116022333
Ribosome biogenesis [BR:
itr03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
116022333
Membrane trafficking [BR:
itr04131
]
SNARE
SNARE associated proteins
Others
116022333
Autophagy
Aggrephagy
Other aggrephagy associated proteins
116022333
Exosome [BR:
itr04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
116022333
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
RuvB_N
AAA_2
AAA_16
CDC48_2
AAA_33
AAA_5
AAA_22
AAA_14
TIP49
NPHP3_N
AAA_17
RNA_helicase
nSTAND3
AAA_28
Mg_chelatase
AAA_18
ATPase_2
Parvo_NS1
nSTAND_NTPase5
ABC_tran
NB-ARC
Vps4_C
Viral_helicase1
AAA_7
NACHT
IstB_IS21
TsaE
AAA_lid_PRS2_C
DUF815
Zeta_toxin
AAA_24
Zot
Motif
Other DBs
NCBI-GeneID:
116022333
NCBI-ProteinID:
XP_031118849
LinkDB
All DBs
Position
6:6882079..6886117
Genome browser
AA seq
808 aa
AA seq
DB search
MSNQAESSDSKGTKRDYSTAILERKKAPNRLVVDEAINDDNSVVSLHPNTMEKLQLFRGD
TIMIKGKKRKDTVCIALAEDTCEEPKIRMNKVVRNNLRVRLGDVVSVHQCPDVKYGKRVH
ILPVDDTIEGVTGNLFDAYLKPYFLESYRPVRKGDFFLVRGGMRSVEFKVIETEPGEYCV
VAPDTEIFCEGEPVRREDEDRLDEVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVK
PPKGILLYGPPGSGKTLIARAVANETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKN
APSIIFIDEIDSIAPKREKTNGEVERRIVSQLLTLMDGLKSRAHVIVMGATNRPNSIDPA
LRRFGRFDREIDIGVPDEVGRLEVLRIHTKNMKLAEDVDLEKIAKDTHGYVGADLAALCT
ESALQCIREKMDVIDLEDETIDAEILNSMAVTNEHFQTALGTSNPSALRETVVEVPNVSW
EDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQ
ANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQRGSSVGDAGGA
ADRVLNQLLTEMDGMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDEDSRHQI
FKACLRKSPVSKDVDLRALAKYTQGFSGADITEICQRSCKYAIRENIEKDIEREKKRREN
PEAMEEDVEDEVAEIKAAHFEESMKYARRSVSDADIRKYQAFAQTLQQSRGFGSEFRFSE
ASTGGAAATGSDPFATSAGGADEDDLYS
NT seq
2427 nt
NT seq
+upstream
nt +downstream
nt
atgagtaatcaagcggaatcgtctgactcgaaggggacgaagagggattacagtacggcg
attcttgagaggaagaaggcgcctaaccggttggttgtggatgaggcgatcaacgatgac
aactctgtagtgtctcttcaccccaacactatggagaagctccagctcttccgtggtgat
actatcatgatcaagggtaagaaaagaaaggatacagtctgcattgcccttgctgaggac
acatgtgaagaacctaagattaggatgaacaaggttgtcaggaacaacctcagagtgagg
ctgggagatgttgtttctgtccaccagtgtcctgatgtcaagtatggcaaacgtgttcac
attcttcctgtggatgacaccattgaaggagttactggaaatctctttgatgcttacttg
aaaccatatttccttgaatcgtaccgacctgtgaggaagggtgacttcttccttgtgaga
ggtggaatgagaagtgttgagtttaaggttattgagaccgaacctggggagtactgtgtt
gttgcccctgatactgaaatcttctgtgagggcgaacctgtgagaagggaagatgaggat
cggttggatgaggttggatatgatgatgttggtggtgttcgtaaacagatggctcagatc
agggagcttgttgagcttccactaaggcatccacagctcttcaaatcaattggtgttaag
cctccaaaaggaatccttctatatggacctcctggttcagggaagactttaatagcaagg
gcggttgcaaatgaaactggtgctttcttcttctgcattaatggaccagaaattatgtca
aaattggcaggagaaagtgaaagcaatcttaggaaagcgtttgaggaagctgagaagaat
gcaccatcaatcatcttcattgatgagattgattcaattgctcccaaacgagagaagaca
aatggagaagttgagaggaggattgtttcccagctactgacacttatggatggactcaaa
tctcgtgcacatgtcattgtcatgggtgccacaaatcgtcccaatagtattgatcccgca
ctaaggaggtttggaagatttgacagggaaatagacattggtgttcctgatgaagttggg
cgtcttgaggttcttcggatacataccaagaacatgaagcttgctgaagatgttgatttg
gaaaagattgccaaggatactcatggttatgttggcgctgatttagcagcattgtgtacc
gagtctgctcttcagtgcattagagagaagatggatgttattgatttggaagatgaaacc
atcgacgcagaaatactcaactcaatggctgttaccaatgagcacttccaaactgctctt
ggaacgagcaatccttctgcattgcgtgaaactgttgttgaagttcctaatgtctcctgg
gaagatattggtggccttgaaaatgtcaagcgggagctccaagagactgtacaatatcca
gtggagcatcctgagaagtttgagaagtttggaatgtctccctcgaagggagttcttttc
tacggcccacccggatgtggtaagactttgttggccaaggctattgccaatgaatgccaa
gcaaatttcatcagcgtcaaaggcccagagttgcttacaatgtggtttggggagagtgag
gccaatgttagagagatatttgacaaggctcgccaatctgctccttgcgtcctattcttt
gatgaattggattcaattgctacacagagaggaagttcggtaggagatgccggtggggca
gctgatagggtcttgaatcaactcctcacagaaatggatggaatgaatgctaagaagaca
gttttcattattggggctacaaacaggccagacataattgatcctgctcttctgcgtcct
ggccgtcttgaccaattgatttacatccctctccccgatgaagactcccgccatcaaatt
ttcaaggcgtgcctgaggaagtcacctgtctccaaggacgtagacctcagagctctcgcc
aaatacactcaaggcttcagcggggccgacatcacagaaatctgccagcgctcttgcaaa
tatgccattagagagaacattgaaaaggatattgagagggaaaagaagaggagggagaac
cctgaggcaatggaggaggacgttgaagacgaggtagctgagatcaaggctgctcatttt
gaagaatcaatgaagtatgctcgcaggagcgtgagcgacgctgatatcagaaagtaccag
gcgtttgcgcaaaccttgcagcagtcccgaggcttcggttctgaattccgattctccgag
gccagcacagggggagctgctgccacgggatctgatccttttgcaacttcagccggtgga
gctgatgaggatgacttatatagttag
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integrated database retrieval system
