Ipomoea triloba (trilobed morning glory): 116022636
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Entry
116022636 CDS
T07384
Name
(RefSeq) serine/threonine protein phosphatase 2A 57 kDa regulatory subunit B' beta isoform-like
KO
K11584
serine/threonine-protein phosphatase 2A regulatory subunit B'
Organism
itr
Ipomoea triloba (trilobed morning glory)
Pathway
itr03015
mRNA surveillance pathway
itr04382
Cornified envelope formation
Brite
KEGG Orthology (KO) [BR:
itr00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
116022636
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
116022636
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
itr01009
]
116022636
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
itr03019
]
116022636
03036 Chromosome and associated proteins [BR:
itr03036
]
116022636
Protein phosphatases and associated proteins [BR:
itr01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
116022636
Messenger RNA biogenesis [BR:
itr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
116022636
Chromosome and associated proteins [BR:
itr03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
116022636
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
B56
TetR_C_16
Motif
Other DBs
NCBI-GeneID:
116022636
NCBI-ProteinID:
XP_031119271
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All DBs
Position
6:complement(6372280..6376346)
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AA seq
477 aa
AA seq
DB search
MLNKFIKRGHRKVPKPDDGEFGDGALGRRGSDSVSVASVVVNNSSIGTNSVQSPAPVTIE
TLPRFRDVPASEQQNLFLRKLQICCFQFDFKDMLKMMREKDIKRQTLVELIELIQSGSGK
ICESNQEELIKMISINIFRCLPSALHETTGSENADAEEDEPYLEPSWPHLQLVYELLLRY
VVSSETDAKVAKRFIDHTFLLKLLDLFDSEDPREREYLKTILHRIYGKFMVHRPFIRKAI
GNIFYRFIYESDRHSGIGEILEILGSIINGFALPMKEEHKLFLVRALVPLHKAKSVATYH
QQLSYCIVQFVDKDYKLADVVIRGLLKYWPVTNCQKEVLFLGEIEEVLDATQASEFQRCM
VPLFKQIASCLSSLHFQVAERALFLWNNEHIVSLISQNRNVILPIVFEALEKNIRDHWNT
SVNGLTVNVRKMFLEMDADLFEECQRQYAERVARTAEVEGQRELRWQKLTTAAANGG
NT seq
1434 nt
NT seq
+upstream
nt +downstream
nt
atgttgaataagtttataaaaaggggacaccggaaggtgccgaagccggatgatggggaa
tttggcgatggggcgctgggaaggcgaggctctgactcagtttctgttgccagtgtggtg
gtgaataattcttcaattggaacgaattctgtgcagtcgccggcgccggtgactattgag
accttgccgaggttccgcgacgtgccggcatcggagcagcagaacttgtttttgaggaag
cttcagatttgttgcttccagttcgatttcaaggatatgttgaagatgatgagggagaag
gatatcaagaggcagactcttgtggagctcatagaattgattcaatcgggttctgggaaa
atctgtgagagcaatcaggaggagctgataaagatgatatctatcaatattttccggtgc
ttgccttcggctttgcatgagaccacgggatcagaaaatgcagacgctgaagaagatgag
ccctatcttgagccttcatggccacatttacagctagtatatgagctgcttttgcggtat
gtggtttcatctgaaactgatgcaaaggtggcaaagcggttcattgatcacacgttcctg
ttgaagttattggatttgtttgactccgaggacccaagggaaagagagtatttaaagaca
attcttcaccgcatatatgggaaattcatggtgcaccggccatttatcagaaaggcaatt
ggtaatatcttttatcggtttatatatgagtcagatagacacagtggcataggtgagatt
ttggagattttagggagtataataaatgggtttgcattgccaatgaaggaggaacacaaa
ctgtttcttgttcgggcactcgtaccgctccacaaggccaagtctgttgcaacatatcat
cagcagttgtcatactgtattgttcagtttgtggataaggattacaagttggctgatgtg
gttataagaggtttgttgaaatactggcctgtcactaattgccaaaaggaggttcttttc
cttggggaaattgaagaagttttggacgccacacaggcatcagaatttcagcgctgcatg
gttccactttttaaacagattgcttcttgccttagcagtttacactttcaggttgcagaa
cgtgcactatttttgtggaataatgaacacatagtaagcctgatttcccagaatcggaat
gtcattttgccaattgtctttgaggctctggaaaagaatatacgagatcattggaataca
agtgtcaatggcctgactgtcaatgtccggaaaatgttcttggaaatggatgctgatttg
tttgaagagtgccaaagacagtatgcagagagagtggctcgtactgcagaagtggaagga
caacgagaattaaggtggcagaaactaacaactgcagcagccaatggaggctaa
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