KEGG   Ipomoea triloba (trilobed morning glory): 116022721
Entry
116022721         CDS       T07384                                 
Name
(RefSeq) MMS19 nucleotide excision repair protein homolog isoform X1
  KO
K15075  DNA repair/transcription protein MET18/MMS19
Organism
itr  Ipomoea triloba (trilobed morning glory)
Brite
KEGG Orthology (KO) [BR:itr00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:itr03036]
    116022721
   03400 DNA repair and recombination proteins [BR:itr03400]
    116022721
Chromosome and associated proteins [BR:itr03036]
 Eukaryotic type
  Centrosome formation proteins
   Spindle formation proteins
    116022721
DNA repair and recombination proteins [BR:itr03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    Other NER factors
     116022721
SSDB
Motif
Pfam: MMS19_N MMS19_C HEAT_2 HEAT_EZ DUF7579 ERAP1_C
Other DBs
NCBI-GeneID: 116022721
NCBI-ProteinID: XP_031119429
LinkDB
Position
6:complement(20274674..20284223)
AA seq 1141 aa
MANSSKCVKHIESYVSSSTSPAQQAAIVDTIAALVKNDLLTLEELVREMEMYLTTTDTII
RSRGILLLGELLTQLSLKPLTDAAIQSLIGFFIERLADWKALRGALVGCLALLRRKVDVG
MVTQSQAMAAAQSFLENMQVQSLGQHDRKLCFQILECLLNCHPDAVEPLGDVLVYGICES
IDGEKDPQCLVLIFRIFEALARLFPHSSGSLASYAEDLFEILGCYFPIHFTHSKSEDADI
KREELSQALMLAFASTPFFEPYAIPLLLEKLSSDLPSTKVESLKYLSYCTLKYGGDRMAK
YFEALWSALKDVLFIKPQSTLSIEFELVDGIGFQESEIMIQALELLQMVIQRSNGSFLSF
ILADEDIKTFMNSLNGLKDFDSASAQNKQRLHAVGCILSASARSSFASCDAVFQNFFTSL
MDALMLSVEIPSKDSVVLSRRFNFGALYLSVELLSACRCLVLNCDGLTPIPDFLSMAWCC
ILCCFSTSLSNSLISLLQTTSVESTPNTNVYYGVKGLQTLAMFPGSFTQVPKPIFENVLL
TLMSVITTDFNKTFLWKTALKALVDIGFYVDKSCEDEKVASFESVVMEKIGFLISSNDLT
VPLTLKLQTTFDIGMTGKKFMHRAVQELDKTLFDNLSQIFVSENVKSTELTIPLLDCYSR
NVLPWFHDNGGSEEVSLNLAFNILEKIEKSTHSSIGFQESELLDAIMIALKHAVASCSEE
NQERIIKKAFDLISSGSLKDLKPYTTPLNSNGGQLTSMLEGISCRDECIISLIASVIIAL
RPQTHIPNLKLLLQLFLMTLLKGHIPSAQALGSLVNKLPLETSIKNCNLEEAIDVLFNNE
IWISCNFYDGNKCSTLDNGSAIDFSSLRIYGCDVSNKIHALVGLAWIGKGLLMRGHQKIK
DITSTFVSCILSNGNVGAFEELDGQLKDNKELKVISLRKSAADAFHVLMSDSEACLNRNY
HATVRPLYKQRFYNMVLPILLSSILEIDSPTTRSLLYRAFSHLISGAPLIAVVSDAKKVI
PVLVDCLFMLQKDALDKDIIFSVLLVLSGILMDKNGKEAVIENAHLIVHQLNNLVSYPHM
MVVRETAIQCLVALSGLPQSRIYPLRKEVLQAISKALDDPKRVVRQEAVRCRHAWLEIEG
R
NT seq 3426 nt   +upstreamnt  +downstreamnt
atggccaattcaagcaagtgcgtaaagcacattgagtcgtacgttagttcatccacctct
ccagctcaacaggctgcaattgtagacactattgctgcccttgtgaaaaatgacttgttg
actctagaggagctggttagagagatggagatgtatttgacaactactgataccatcatc
cgctcaagagggatcctcctcctcggggaactattgacacaactatcattgaagccttta
actgatgctgctatacagagcttgataggattcttcatagagaggctggcagattggaaa
gctttgcgtggtgctctagttggttgtttggcgctattgaggaggaaagttgatgttggc
atggtcacacagagtcaagcaatggctgctgcacaatcttttttggagaacatgcaagtg
cagtccttgggacagcatgacaggaagctctgctttcaaattttggaatgcctattaaat
tgccatcctgatgcagttgagccgttgggtgatgtccttgtttatggaatttgtgaatcg
attgatggagaaaaggatccgcaatgcttggtgctcatatttaggatttttgaagctcta
gcacgattatttcctcattcttctgggtcacttgcaagttatgcagaggatctttttgag
attcttggatgttacttccctattcattttacacattcaaaaagtgaagatgctgatata
aagagggaggagctctcgcaagcactgatgctggcatttgcgtctacacctttttttgaa
ccgtatgcaattcctttacttcttgagaaactatcttctgatttgccgtcaacaaaggtt
gaatctctaaagtaccttagctattgcacattgaaatatgggggagatagaatggcaaag
tattttgaagctctttggtctgcattgaaagatgttttattcattaaaccacaatccact
ttgtcaatagaatttgagttagttgacggtataggttttcaagagagtgaaataatgatt
caagcccttgagctgcttcagatggttattcagcgaagtaatggttcattcttaagtttt
atcctggctgatgaggacataaaaacatttatgaactcattgaatgggttaaaagatttt
gacagtgcttctgcacagaacaaacagcgattgcatgcagttggttgtattctctcggcg
tctgccagatcttcttttgcttcttgtgatgcagttttccaaaatttctttactagctta
atggatgctctaatgctttcagttgaaattccatctaaagatagcgttgttctttctaga
agattcaattttggagccttgtatctctctgtcgaactactgtctgcatgcagatgtttg
gtgttgaactgtgatggtctcacacctattcctgattttcttagtatggcttggtgctgc
atattatgttgcttctctacttcattgagcaattctttaatttctcttctgcaaacaact
agtgtggaaagcactccaaacactaatgtttactatggagttaaaggtttgcaaactctg
gcaatgttcccgggaagcttcactcaggtgccaaagcccatttttgagaacgttttgtta
acattgatgtcagtcatcactactgatttcaacaaaacatttttatggaaaactgcattg
aaagctttggtagatattggcttctatgttgataaatcctgtgaagatgagaaagtagcg
agctttgaaagtgtagtcatggagaaaattggttttctgatatcttctaatgaccttact
gtgcctttgacactcaaactacaaacaacttttgatattggaatgactgggaagaagttt
atgcacagagcagttcaggaattggacaagacactattcgacaatttgtctcagatattt
gtcagtgagaatgtaaaatcaactgagttgacaatcccgcttttggactgttactctagg
aatgtccttccctggtttcatgacaacggaggttctgaggaagtctcattgaatcttgca
tttaatattttggaaaagattgagaaaagtacgcattccagcattgggtttcaggaaagt
gaacttcttgatgcaataatgattgcactgaagcatgctgtagccagctgttcagaggaa
aaccaggagagaattattaaaaaagcttttgacctaatttcttcaggttcattgaaggat
ttgaagccttatactacaccactcaactccaatggaggacaacttactagcatgttggaa
ggaatttcttgcagagatgaatgtattatctcactcattgcatcagttataatagctttg
cgccctcaaactcacataccaaatcttaaactgctattgcagttatttctaatgaccctc
ctcaaaggtcacattccgtcagctcaggcattgggatctttggttaacaaactaccttta
gagaccagtataaaaaattgtaatctggaagaagcaatagatgtgttatttaacaatgaa
atttggatttcctgcaatttttatgatggaaataaatgctccaccctggacaatggtagt
gctatagatttcagcagtctaaggatatatggttgtgatgtgtctaataagattcatgct
cttgttggattggcctggattgggaaagggttacttatgcgtggtcatcagaagataaaa
gacattactagcacttttgtgagttgcatactttcaaatggaaatgttggggcctttgaa
gagttggatggtcagttgaaagacaacaaagagctgaaagtgatctctttgaggaaatct
gctgcagatgcatttcatgttctcatgagtgattcagaagcttgtttgaacagaaattat
catgcaactgttcgtccactttataagcagcgattttacaacatggtgttgcctatatta
ttatcttcgattttggaaattgattcaccaactactagatccttgctataccgagccttt
tcacatttgatatctggtgctcctctcattgcggttgtgagtgatgccaaaaaggttatc
cctgtgctagtagattgcctattcatgttgcaaaaggatgctcttgacaaagatataatc
ttcagtgtcttattagtcctctctggaatattgatggataaaaatggaaaagaagctgtt
atagaaaatgcgcatctcattgtccaccaacttaataacctcgtttcctatccccatatg
atggtagtccgagaaacagcaattcagtgtcttgttgccttgtcagggctaccccaatca
agaatatatcctttgagaaaagaggttttgcaagccatatcaaaagctcttgatgacccc
aagagagttgttcgtcaagaggcagtcagatgtcggcatgcttggttagaaatcgagggt
agatag

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