Ipomoea triloba (trilobed morning glory): 116022738
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Entry
116022738 CDS
T07384
Name
(RefSeq) plant-specific TFIIB-related protein PTF2-like
KO
K15196
transcription factor IIIB 90 kDa subunit
Organism
itr
Ipomoea triloba (trilobed morning glory)
Brite
KEGG Orthology (KO) [BR:
itr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
itr03021
]
116022738
Transcription machinery [BR:
itr03021
]
Eukaryotic type
RNA polymerase III system
Basal transcription factors
TFIIIB
116022738
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
BRF2-like_C_cyclin_rpt
DUF7117
DZR
Motif
Other DBs
NCBI-GeneID:
116022738
NCBI-ProteinID:
XP_031119449
LinkDB
All DBs
Position
6:18446132..18450064
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AA seq
531 aa
AA seq
DB search
MEGSRVCKSCGTRGKVVTDHDTGNSVCTSCGVVQDFDNFQAHIGGINGPVGTYVRVGTVG
NGSLYSYKETKIYEAQKVIEDLMYKLGFSATKSSEVKHMIEKITEGEYGQGRWFSVLIGA
CSYIAMRKDLKALPMEEVANLVGCDVFEMGRMIKRVVDFLDLRLPEFDIVNSFEQAIRSC
PSFREVSEDMISRMLKQGVFLVQCLVNWFVTTGRRPMPVVAAVLVFVAELNQISIKMGDV
ASELHVALKTCKLRYKELLERLVKVAQALPWGKDVNTKNIMRNAPSVIQYMELKSMSNRD
DKGNGSECAVYDMNYLVGDCLSKENLYGYDVYGTENDSQYFKGENSQALYTEAPERLQLS
HESLSMIYSELKNEVSIAKETTENGYTRTGKGREYDILTFTDWWKGESELSRKLLLKQIL
EKDTGLNATPPSFDRGCLAYERRREKIYAAKLRIQRTMHPSAAAAADDDKKDLSVSDIGK
HGKKRKRKMHFDIDWEDFIIETLLLHQVREEEIEKGHYIALLGLHVFNGGS
NT seq
1596 nt
NT seq
+upstream
nt +downstream
nt
atggagggttctcgtgtctgcaagagttgtggtactagagggaaagttgtcacggaccat
gacacgggcaattcggtttgcacatcttgtggcgttgttcaggattttgacaattttcag
gctcatattgggggcattaatggtcctgttggtacatatgttcgtgttggaactgtcggc
aatggaagtctttatagttataaagagactaagatttatgaagcacagaaggtgattgag
gatttgatgtataagttaggattttcagcgacaaaatcaagtgaggttaaacatatgatt
gagaaaattactgaaggtgaatatggtcaaggtagatggttttctgtgcttattggtgca
tgctcttacattgccatgaggaaggatttgaaagcgttgcccatggaggaagtggcgaat
ttggttggttgtgatgtttttgaaatgggccgaatgatcaaacgggttgtggattttctt
gatttgaggttgccagagtttgatattgtgaactcgtttgaacaggcaattagaagctgt
ccaagttttagggaggtttcggaggacatgatctcaaggatgttgaagcaaggggtattt
ttggtgcagtgcttggtgaactggtttgtgacaacgggaaggaggccaatgccagtggtc
gcagcagtgttggtgtttgttgcagagctaaaccaaatttccattaagatgggagatgtg
gcaagtgagttacacgtggccctcaaaacttgtaaattaagatacaaagagcttttggag
agactcgtaaaggttgcccaagccttgccttggggtaaggatgttaacacaaagaatata
atgcggaatgcaccatctgtcattcagtatatggagttgaagtcaatgtcaaaccgcgat
gacaagggaaatggttctgaatgtgctgtttatgatatgaattacttggttggtgactgc
ctgagcaaggaaaatttatatggctatgatgtttatggcactgaaaatgattcgcaatat
ttcaaaggtgaaaactcccaagctttgtacaccgaagctccagaaagattacagctttct
cacgagtccttgtcaatgatttattcagaattgaagaatgaggtgtctatagccaaggaa
actactgagaatggatacaccagaacagggaaagggagagaatatgacatacttactttt
accgactggtggaagggtgaatcagaactaagcagaaagcttcttctgaagcaaatattg
gagaaagatacggggctaaatgctacacctccttcgttcgatagaggttgcttggcatat
gaaaggcgaagagagaagatatatgctgctaagctgcgcattcagaggactatgcatcct
tcagctgctgctgctgctgacgatgataaaaaggatctttctgtttcagatattggtaaa
catgggaagaaaagaaagaggaaaatgcattttgatattgattgggaagatttcattatt
gaaacgcttctccttcatcaggtcagagaagaagagattgagaaggggcattatattgca
ttgctgggtctgcatgttttcaatggcggaagttga
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