Ipomoea triloba (trilobed morning glory): 116022751
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Entry
116022751 CDS
T07384
Name
(RefSeq) oligouridylate-binding protein 1B
KO
K13201
nucleolysin TIA-1/TIAR
Organism
itr
Ipomoea triloba (trilobed morning glory)
Brite
KEGG Orthology (KO) [BR:
itr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
itr03019
]
116022751
03041 Spliceosome [BR:
itr03041
]
116022751
Messenger RNA biogenesis [BR:
itr03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
116022751
Spliceosome [BR:
itr03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
116022751
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Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_10
RRM_7
RRM_5
RRM_DEAH11
Motif
Other DBs
NCBI-GeneID:
116022751
NCBI-ProteinID:
XP_031119470
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All DBs
Position
6:20773071..20779755
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AA seq
422 aa
AA seq
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MQHQRLKQQQQALMQQALLQQQSLYHPGLLAAPPIEPIPSGNLPPGFDPSTCRSVYVGNI
HPQVTEPLLQEVFASTGPMEGCKLIRKEKSSYGFIHYFDRRSAGLAIMSLNGRHLFGQPI
KVNWAYASGQREDTSSHFNIFVGDLSPEVTDAMLFACFSTYPSCSDARIMWDQKTGRSRG
FGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGANANDDKQSSDSKSVVELTNGSS
EDGKEAANSEAPENNPQFTTVYVGNLAPEVTQVDLHRHFHALGAGVIEEVRVQRDKGFGF
VRYSTHAEAALAIQMGNTQSILCGKQIKCSWGNKPTPPGTASNPLPPPAPAPLHGLSATD
LLAYERQLAMSKMGGFNALMHPQGQHTLKQASMGMGAAGASQAIYDGGFQNVAAAQQLMY
YQ
NT seq
1269 nt
NT seq
+upstream
nt +downstream
nt
atgcagcaccagaggctgaagcagcaacaacaagccttgatgcaacaagctctcctgcaa
caacagtctctctatcacccgggcctcttagctgctcctccgattgagccaataccaagt
ggaaatttgcctcctgggtttgatccaagcacatgccgcagtgtgtatgttgggaatatt
cacccacaggtgactgaacctcttctgcaggaagttttcgctagtactggtcctatggaa
ggatgcaagcttatacgaaaggaaaagtcatcctacggtttcattcattactttgaccgt
agatctgctggccttgctataatgtcgctgaatggcaggcatctgtttggccagcctatt
aaagtgaactgggcatatgctagtggtcagagggaagatacttctagccatttcaatata
tttgtaggtgacctcagccctgaagttaccgatgccatgttatttgcttgcttctccaca
taccctagctgttctgacgcaagaatcatgtgggatcagaagactgggcgctctaggggt
tttggatttgtttctttccgaaaccaacaggatgctcaaagtgccattaatgatctaact
ggaaaatggcttggcagtagacagatacgatgtaactgggcaaccaaaggtgctaatgcc
aatgatgacaaacaaagttccgactcaaaaagtgttgtggaactaacaaatggttcatca
gaagatggtaaagaggctgcaaatagtgaagctcctgagaataacccacaattcaccact
gtgtatgtgggcaatcttgctcccgaggtaactcaggttgaccttcatcgccacttccat
gcccttggtgcgggagtcattgaggaagttcgtgtacagcgtgataaaggtttcggtttt
gtaagatacagcacccatgctgaggctgctttggccattcagatgggaaacacacagtca
attctttgtggaaaacaaattaagtgttcatggggtaacaagccaacaccacccggaaca
gcatcaaaccctcttccaccaccagcgccagcgcccctgcacggcctatcagccactgat
cttctggcgtacgagcggcagctagcgatgagcaagatgggaggcttcaacgccctgatg
cacccccagggtcagcacactctaaagcaggcgtcaatgggtatgggcgctgccggagcc
agccaagccatttacgacggtgggtttcagaatgtggctgctgcccagcaactcatgtac
tatcagtga
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