Ipomoea triloba (trilobed morning glory): 116022824
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Entry
116022824 CDS
T07384
Name
(RefSeq) notchless protein homolog
KO
K14855
ribosome assembly protein 4
Organism
itr
Ipomoea triloba (trilobed morning glory)
Brite
KEGG Orthology (KO) [BR:
itr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
itr03009
]
116022824
Ribosome biogenesis [BR:
itr03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
116022824
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_THOC3
WD40
Beta-prop_WDR5
Beta-prop_WDR3_1st
Beta-prop_IFT122_1st
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_WDR3_2nd
Beta-prop_EML_2
WD40_Gbeta
EIF3I
Beta-prop_WDR36-Utp21_2nd
WDR55
DSE1_N
WD40_MABP1-WDR62_2nd
Beta-prop_TEP1_C
Beta-prop_Aladin
ANAPC4_WD40
WDR90_beta-prop_4th
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
Beta-prop_WDR36-Utp21_1st
WD40_MABP1-WDR62_1st
Beta-prop_WDR75_1st
Beta-prop_WDR19_1st
Beta-prop_SCAP
NBCH_WD40
ASA1
Beta-prop_EIPR1
Beta-prop_WDR41
Beta-prop_IFT140_1st
Beta-prop_DCAF12
Beta-prop_RIG_2nd
CFAP251_N
NLE
Beta-prop_DCAF4
Beta-prop_VPS8
WD40_RFWD3
Beta-prop_WDR35_TULP_N
Tricorn_2nd
Beta-prop_NOL10_N
eIF2A
Beta-prop_SPT8
Beta-prop_HPS5
PAC11
PD40
TRM82_WD
Tricorn_N
Ge1_WD40
RMC1_N
WDR54
Beta-prop_Vps41
Beta-prop_WDR75_2nd
Beta-prop_NUP159_NUP214
Beta-prop_ELP1_1st
TRAP-delta
TP_0598_N
Motif
Other DBs
NCBI-GeneID:
116022824
NCBI-ProteinID:
XP_031119566
LinkDB
All DBs
Position
6:complement(11087100..11094644)
Genome browser
AA seq
483 aa
AA seq
DB search
MSEAMDVETPIPLLRDSTSSVMCRLTDPEGTPLGTSMYLPEIAGPKELNQMVNKLLNNDE
KLPYAFYISDQELVVHLGSYLEKNKVSVEKVLTIVYQPQAVFRIRPVTRCSATIAGHTEA
VLSVAFSPDGQQLASGSGDTTVRLWDLNTQTPLFTCKGHKNWVLCIAWSPDGKYLVSGSK
TGELICWDPQTGNPLGNPLTGHKKWITGISWEPVHLSAPCRRFVSASKDGDARIWDATLR
KCVICLSGHTLAITCVKWGGDGVIYTGSQDCTIKVWETSQGKLIRELKGHGHWVNSLALS
TEYVLRTGAFDHTSKNFSSPEEMKKVALERYNKMRGNAPERLVSGSDDFTMFLWEPAVSK
HPKTRMTGHQQLVNHVYFSPDGQWIASASFDKSVKLWNGISGKFIAAFRGHVGPVYQISW
SADSRLLLSGSKDSTLKVWDIRTKKLKQDLPGHADEVFAVDWSPDGEKVASGGKDRVLKL
WMG
NT seq
1452 nt
NT seq
+upstream
nt +downstream
nt
atgtccgaagcaatggacgtggaaactcccattccgttgctcagagattccacgagtagt
gtcatgtgtcggttgacagacccggagggtactccacttggaacttcgatgtaccttccc
gaaatcgctggtcccaaagagctcaatcaaatggtcaacaagcttcttaacaacgatgaa
aaattgccttatgcattttatatctcagaccaagagctggtggtgcatcttggttcatat
ttagaaaagaacaaagtttctgttgagaaagtcttgactatagtatatcaacctcaagca
gttttccggatccgtcctgtaacccgatgttctgcaacaattgctggtcataccgaagct
gtactttcagtggccttcagccctgacggacagcagttggcaagtggctcaggtgatacc
acggttcgattatgggatttgaatacccaaacaccattgttcacatgtaaaggtcataaa
aactgggttctttgtatcgcgtggtcacctgatggtaaataccttgtgagtggaagtaaa
actggggagcttatatgctgggatccacagactgggaaccctttgggcaatcctcttact
ggccacaagaaatggataactggtatttcctgggaacctgtacacctcagtgctccatgt
cgccgctttgtaagtgccagtaaagatggtgatgcacgaatatgggatgctacattgagg
aaatgcgttatttgtcttagtggtcatacacttgctatcacttgtgtgaaatggggtgga
gatggagtgatttatacaggatctcaggactgtacaatcaaggtatgggaaacttcacag
gggaagcttattcgtgagttgaagggtcatggacattgggttaactccttggcattaagc
actgaatatgtacttcgcactggtgcttttgatcacactagtaaaaacttttcttcccct
gaggaaatgaagaaggtagcattagaaaggtacaataaaatgagaggtaatgctcctgag
agattggtttctggatcagatgatttcacaatgttcctgtgggaacctgctgtcagtaaa
caccccaaaactcgtatgactggtcatcaacagcttgttaatcatgtttacttctctcct
gatggacaatggatagcaagtgcatcatttgacaagtcagtgaagctatggaatggtatt
agtggaaagttcattgccgctttccgcggtcatgttgggcctgtctatcagatcagctgg
tcagctgacagtaggttgcttttgagtgggagcaaagactcaaccttgaaggtttgggat
attcggacaaaaaagttgaaacaagaccttcctggccatgcagatgaggtgtttgctgtt
gactggagtccagatggtgagaaagttgcctctggtggcaaagacagagttttaaagctt
tggatgggttaa
DBGET
integrated database retrieval system
