Ipomoea triloba (trilobed morning glory): 116022879
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Entry
116022879 CDS
T07384
Name
(RefSeq) nuclear pore complex protein NUP98A-like isoform X1
KO
K14297
nuclear pore complex protein Nup98-Nup96
Organism
itr
Ipomoea triloba (trilobed morning glory)
Pathway
itr03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
itr00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
116022879
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
itr03019
]
116022879
03036 Chromosome and associated proteins [BR:
itr03036
]
116022879
Messenger RNA biogenesis [BR:
itr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
116022879
Chromosome and associated proteins [BR:
itr03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
116022879
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nucleoporin2
Nup98_GLEBS
Motif
Other DBs
NCBI-GeneID:
116022879
NCBI-ProteinID:
XP_031119627
LinkDB
All DBs
Position
6:complement(13374499..13380108)
Genome browser
AA seq
1071 aa
AA seq
DB search
MNANWSLLDGAVHNSASQCSFSFCSQETPCTSMLSVNSPFSAQTQTNQVTGFASTQSNAT
SHFPLVHSNMFSAQTQHSGVTPFSPFSSRSNANSPAFKKQKNANSPFPSVHSNPFISPQT
QSTAATKLSPFAPFSGHSNTNSPFQYVFSSNAFSGQTQSSGVTGFAPFSSQSNTNSPFPS
VSSNAFSGQTNSSGLTGFAPFCSQSNANSYLSNYSNPFTSQSRSFNSTLSTTIPISGSRV
APYASAKEPEGNFHSISSMPVYTSKSHEELRFEDYSLCNKAPLPVSAWSPLGGAQATPFT
SMPSVNSPFSAQTQTNQVTGFASTQSNATSHFPLVHSNMFSAQTQHSGVTPFSPFSSRSN
ANSPAFKKQKNANSPFPSVHSNPFISPQTQSTAATKLSPFAPFSGHSNTNSPFQYVFSSN
AFSGQTQSSGVTGFAPFSSQSNTNSPFPSVSSNAFSGQTNSSGLTGFAPFCSQSNANSYL
SNYSNPFTSQSRSFNSTLSTTIPISGSRVAPYASAKEPEGNFHSISSMPVYTSKSHEELR
FEDYSLCNKAPLPVSAWSPLGGAQATPFTSMPSVNSPFSAQTPYASTKEPEGNFHSISSM
PVYTSKSHEELRFEDYSLSIKDGQCATTQTGNGFQLNNSFYPSLFPSVKPTQTGFISPEN
TQSIPSNSPGLFTPSTSATTQENTFASSSAFDFPKSPNIAPPLPSFVSNSSVSQVSTTES
TLCSNCNHAKTQSLQPGLVGPSTNLSPNQLKPSSIQQTVQELGKDDAVPVSSSHPGSVIS
VQYGISSLSVSDKAAPTRRRSLLIVRHPSLNRTKMLCPRYSLDSNASRVPFFMAGEEKAT
EGVAKTNSAIFPRENPRSWIHPPTKESPQSHNPNTLPEMEHTSINVYGNGNVTLQVHRAK
EKQTDTSEGVINYKHDTIDVDGIMPKLKNDDYYTEPSIQELAAREKEEPGFCHRVKDFVV
GRRGFGSIKFTGETDVEGLELDSLVQFNYHEVVVYMDDSKKPEVREGLNKPAEVTLLNVK
CINKKTGEEYKDGHLVDKYKNLLIRKSAEQGAEFVSYDPVKGEWKFKVMHF
NT seq
3216 nt
NT seq
+upstream
nt +downstream
nt
atgaatgcaaattggtctcttttggatggtgctgtgcataattctgcaagtcagtgtagt
ttcagtttttgttcacaggaaacgccatgcacttcaatgctatctgtcaattctcctttt
tctgctcaaacacaaaccaatcaagtaactggatttgcttctacccaatcaaatgccact
tctcatttccctttggttcattccaatatgttctctgctcaaactcaacacagtggagta
acaccattttctccgttttctagccgatcaaatgccaattctcctgctttcaaaaaacaa
aaaaatgccaattctcctttcccttctgttcattcaaatccctttatttcacctcaaact
caaagcactgcagcaactaaactttcaccatttgcaccattttccggccattcaaacaca
aattctcctttccaatatgttttctcatcaaatgcgttttctggtcagactcaaagcagt
ggagtaaccggatttgcaccattttccagccaatcaaacacaaattctcctttcccatca
gtttcttcaaatgcgttttctggtcagactaatagcagtggactaactggatttgcacca
ttttgtagccaatcaaatgccaattcttatctctcaaattattcaaatccattcacctct
caatctcggagctttaactcaactctgtcaacaacaatccccatatctggaagtagagta
gcaccttatgcttctgctaaagaaccagaagggaattttcattccatttctagcatgccg
gtttacacgagtaaaagccatgaagaactgaggtttgaggactattctctttgcaataaa
gctccattacctgtgtcagcatggtctcctttgggtggtgcacaggcaaccccattcact
tcaatgccatctgtcaattctcctttttctgctcaaacacaaaccaatcaagtaactgga
tttgcttctacccaatcaaatgccacttctcatttccctttggttcattccaatatgttc
tctgctcaaactcaacacagtggagtaacaccattttctccgttttctagccgatcaaat
gccaattctcctgctttcaaaaaacaaaaaaatgccaattctcctttcccttctgttcat
tcaaatccctttatttcacctcaaactcaaagcactgcagcaactaaactttcaccattt
gcaccattttccggccattcaaacacaaattctcctttccaatatgttttctcatcaaat
gcgttttctggtcagactcaaagcagtggagtaaccggatttgcaccattttccagccaa
tcaaacacaaattctcctttcccatcagtttcttcaaatgcgttttctggtcagactaat
agcagtggactaactggatttgcaccattttgtagccaatcaaatgccaattcttatctc
tcaaattattcaaatccattcacctctcaatctcggagctttaactcaactctgtcaaca
acaatccccatatctggaagtagagtagcaccttatgcttctgctaaagaaccagaaggg
aattttcattccatttctagcatgccggtttacacgagtaaaagccatgaagaactgagg
tttgaggactattctctttgcaataaagctccattacctgtgtcagcatggtctcctttg
ggtggtgcacaggcaaccccattcacttcaatgccatctgtcaattctcctttttctgct
caaacaccttatgcttctactaaagaaccagaagggaattttcattccatttctagcatg
ccggtttacacaagtaaaagccatgaagaactgaggtttgaggactattctctttccata
aaagatggacagtgtgccacaacacaaactggaaatggattccagttaaataattccttt
tatccttctctattcccctctgtgaagccaacacaaacgggttttatttcaccagaaaat
actcaatcaattccctcaaattcacctggattgttcacaccttctacttcagcaacaaca
caggagaatacttttgcatcttcatctgcttttgattttcccaaatcaccaaatattgct
ccaccattaccatcctttgtttccaactcaagtgtatctcaagtttcaactactgaatcg
accttgtgctcaaattgcaatcacgccaaaactcagtcactccagccaggtttagttgga
ccaagtactaacctttctcccaatcaactgaagccatcaagcattcaacagactgtgcag
gaacttgggaaggatgatgcagtaccggtgtcttctagccatccgggatcagtgatttcg
gttcaatatggaatttcttctttatctgtttctgacaaggcagctcccacacgaagaaga
tccttgctcatagttcgacatccttctttgaatcgaactaagatgttatgtccaagatac
agtcttgatagcaatgcttcaagggttccttttttcatggctggtgaggaaaaggcaaca
gaaggagttgcaaagacaaattctgctatatttccaagagaaaatcccaggtcttggatt
catcctccaactaaagagtctccccaaagtcataatccaaacacattgcctgagatggaa
catacatctatcaatgtgtatgggaatggtaatgtcacactacaagtgcatcgggccaaa
gagaagcaaaccgatactagtgagggtgtgatcaactataaacatgacactattgatgtt
gatggcataatgccaaagttaaagaacgacgactactacacagaaccgtcaatacaagaa
ttggcagcaagggaaaaggaagagccggggttctgccaccgcgttaaagattttgtggtc
ggaaggcgaggctttggttccatcaagtttacaggagagacagatgttgaagggcttgaa
cttgattctctagtccaattcaactatcatgaggtggttgtgtacatggatgatagcaag
aaacctgaagtgagagaaggcctgaacaagcctgctgaggtgacacttcttaatgttaag
tgcatcaacaagaagacaggtgaggagtataaagatgggcatttggttgacaagtacaag
aatctgctcatcagaaagtcagcagagcaaggtgcagaatttgtgtcttatgatccggtg
aaaggggagtggaaattcaaggtcatgcacttttga
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