Ipomoea triloba (trilobed morning glory): 116023139
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Entry
116023139 CDS
T07384
Name
(RefSeq) transcription initiation factor TFIID subunit 4b-like
KO
K03129
transcription initiation factor TFIID subunit 4
Organism
itr
Ipomoea triloba (trilobed morning glory)
Pathway
itr03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
itr00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
116023139
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
itr03021
]
116023139
03036 Chromosome and associated proteins [BR:
itr03036
]
116023139
Transcription machinery [BR:
itr03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
116023139
Coactivators
SAGA/TFTC/STAGA complex
116023139
Chromosome and associated proteins [BR:
itr03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
116023139
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAF4
RST
Motif
Other DBs
NCBI-GeneID:
116023139
NCBI-ProteinID:
XP_031119972
LinkDB
All DBs
Position
6:complement(24438692..24444002)
Genome browser
AA seq
886 aa
AA seq
DB search
MDASIMKLLEEDEDETLHSCADLEAFTAALDRDIGSSSSVPSASDAGNACTSSQFIQWQT
TTSHGQNTMSQSLQDSRDMLQKEQNSSELMLKQHCLDAGNQYQKDSCLDANQPPWTEETF
RAMEVQNSGNDPVHIQEQNGTQNPESQHLNIQSFSTQQSISIAMSGQWANLNGTSGQQIT
TKGVTSQKEVLQSKSSQPMANVPKKGIQLPFAILVPHLQTQVDKDRGMQLETLYLKLKKN
EISKDVFVRHMRSIIGDHKLKMAILKFQYQTARNTEKQASAQQQQQTLSNVQIPTDVNNL
KMESRECQADFQGTPENQVSSSGLSAIKQEEHLPFPIQGLSKQQQQHLHFPRASFSTYLK
GNNNNTCSATNSSSTPAYAKPQHQDLLIRPIAHQNIGATQLRPGTYSMNMINSPNTERKG
SLGEPKRAVTHTTSNSMAQQNSVQWQSSTNKEQRNIPVDHFPEPQHKSQISSPSISVQGG
STVGTSKELQSSRMGFSSSASDGPSNFRSTPMSAQVDTSSLLNSCKPPVTSPNEPGNNGK
TPLKNPLIGQKKPLETLGSMPPPPSKKPKVSGDLLGQSIEQLNDVAAVSGVNLREEEEQL
FSGANEDGRVSEASKRVVQEEEERLILQKFPLQKKLTEIMRKCGIKNRSSDVERCLSLCV
EERMRVLMTTLIRFSKQRVDIEKLRHRTIPTSDVRKQIMVINERAKEEWEKKQAEIAKFQ
KANESEDDTAADGDKEKDEGHVKSGKVNKGEDEKTRATAANVAARAAIGGDDMLSKWQLM
AEQARQKREGSGLEGASDSQARKDASWRPVSILNRNTSDPQESEKDASSPTGTVRTFGKN
KVVTSQIARTITIKDVIAALEMEPQMSRSTLVYRLYERIRFDASTE
NT seq
2661 nt
NT seq
+upstream
nt +downstream
nt
atggacgcttcgatcatgaaacttctcgaggaagacgaggacgaaacactgcattcatgt
gcggatttggaggcgtttacagccgccctcgatagagatatcggatcttcgtcgtctgtg
ccttcagcttccgatgccggaaacgcttgcacctcaagtcagtttattcagtggcaaact
accaccagtcatggccaaaataccatgtctcagagtcttcaagattccagggacatgcta
caaaaagagcagaattcatctgaactgatgctaaagcagcattgcctagatgctggaaat
caatatcaaaaggattcctgcctggatgcaaatcaaccgccatggactgaagaaacattt
cgagcaatggaggtgcagaattctggaaatgatcctgttcatatccaggagcaaaatgga
actcaaaatccagaatctcagcatctgaacatacagagtttcagtactcaacagtccatc
tccattgcgatgagtggtcaatgggcaaatttgaatgggacgagtggtcagcagatcacg
acaaaaggtgtaactagccaaaaagaagtgttacaatctaaaagtagtcaacctatggcc
aatgtaccaaaaaaaggaattcaattgccatttgccattttggtccctcacttacaaacc
caagtcgataaggacagaggaatgcagctcgagacattgtaccttaagcttaagaaaaat
gaaatttctaaggatgttttcgttaggcatatgagaagtattataggtgaccataagctc
aagatggccatattaaagtttcaatatcagactgctaggaacacagagaagcaggcttca
gcacaacaacaacagcaaacactatcaaatgtgcaaataccaacagatgtgaacaacttg
aaaatggaaagcagggaatgccaggcagattttcaagggaccccagaaaaccaagtgtct
tcttctgggttgagtgcaataaaacaagaggagcatctaccgtttccaattcagggactt
agtaagcaacagcaacagcatttgcatttcccgcgggcatctttttccacatatttaaag
gggaacaataataatacatgctctgcgacaaacagttcatctacaccggcatatgccaaa
cctcaacatcaggatctgcttattaggccaattgctcatcagaatataggtgctactcag
ttaagacctggaacttattcgatgaatatgataaattcacctaacacagaaaggaagggt
tctcttggtgaaccaaagagagcagttactcacacaacaagtaactcaatggcacaacag
aattcagttcagtggcaatcatcaaccaacaaagaacagagaaatattcccgtagatcat
tttcctgagccgcagcataagtctcagatatcttctccctctatctctgtgcaaggaggt
tctactgtgggaacttcaaaagagttgcaatcctctagaatgggtttctcttcaagtgca
agtgatggaccttcaaattttcgttcaactcctatgtcagctcaagtagacactagtagc
ttgttaaattcctgtaaacctcctgtcacctctcccaatgaacctggaaataatgggaag
actccactgaaaaatccattaattggccagaagaagccactggaaacactcggttctatg
cctcctcctccaagcaagaagccaaaggtatctggggaccttttaggtcaaagcattgaa
caactgaatgacgttgcagctgtgagtggagttaatctcagggaagaagaggaacagcta
ttttctggagccaatgaagatggtcgagtttctgaagcatctaaacgagttgtgcaagaa
gaagaggaaagactaattttacagaaatttccactgcagaagaaattgactgaaataatg
agaaaatgtggtattaagaatagaagcagtgatgtggagcgatgcttatcattgtgtgtt
gaggaaaggatgcgtgtactcatgactactctcattagattctcaaaacagcgagttgac
attgagaagttgagacacagaacaattccaacctcagatgttaggaaacaaatcatggta
ataaatgaaagagctaaggaagaatgggagaagaagcaagctgaaatagcaaaattccag
aaggcgaatgaatcagaggatgatactgccgcggatggtgacaaggagaaggatgaaggt
catgtgaaatcagggaaggtaaacaagggggaggatgagaagacacgagcaacggctgca
aatgttgctgctcgagctgccattggaggagatgacatgttgtcaaagtggcaactgatg
gccgaacaggccaggcagaaacgcgaaggcagtggacttgagggagcatctgattcacag
gccagaaaagatgcttcatggaggcctgtgtcaatcttgaatagaaacacaagtgatcct
caagaatctgaaaaagatgcttcttcaccgactggcactgtgagaacatttggaaaaaac
aaggttgtcacatcccaaattgctagaaccataaccatcaaagatgtaattgctgccctc
gaaatggagccacagatgtccagatctacattagtatatcgtttgtatgagagaattcga
tttgatgcttccaccgagtag
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integrated database retrieval system
