Ipomoea triloba (trilobed morning glory): 116023195
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Entry
116023195 CDS
T07384
Name
(RefSeq) WD repeat-containing protein LWD1
KO
K11805
DDB1- and CUL4-associated factor 7
Organism
itr
Ipomoea triloba (trilobed morning glory)
Pathway
itr03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
itr00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
116023195
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
itr04121
]
116023195
03036 Chromosome and associated proteins [BR:
itr03036
]
116023195
Ubiquitin system [BR:
itr04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
116023195
Chromosome and associated proteins [BR:
itr03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.3/1.5)
116023195
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
Beta-prop_THOC3
Beta-prop_WDR5
WD40
WD40_Prp19
Beta-prop_CAF1B_HIR1
Beta-prop_WDR3_1st
WD40_WDHD1_1st
Beta-prop_EIPR1
Beta-prop_RIG_2nd
WD40_Gbeta
Beta-prop_TEP1_2nd
Beta-prop_Aladin
Beta-prop_WDR36-Utp21_1st
WDR55
Beta-prop_EML_2
ANAPC4_WD40
Beta-prop_WDR36-Utp21_2nd
Beta-prop_WDR3_2nd
Beta-prop_WDR41
Beta-prop_WDR90_POC16_2nd
Beta-prop_IFT140_1st
MIOS_WD40
Motif
Other DBs
NCBI-GeneID:
116023195
NCBI-ProteinID:
XP_031120041
LinkDB
All DBs
Position
6:complement(9243930..9245883)
Genome browser
AA seq
346 aa
AA seq
DB search
MGASSDPNQDGSDEQQRRSEIYTYEAPWHIYAMNWSVRKDKRYRLAIASLLEQYPNRVEI
VQLDDSNGEIRSDSNLSFEHPYPPTKVIFIPDKECQKPDLLATSSDYLRVWRVADDNSRV
EIKTVLNNNRNSEFSGPLTSFDWNEAEPKRIGTSSIDTTCTIWDIERETVDTQLIAHDKE
VYDIAWGGVGVFASVSADGSVRVFDLRDKEHSTIIYESSEPDTPLVRLGWNKQDPRYMAT
IIMDSSKVVVLDIRFPTLPVVELQRHQASVNAIAWAPHSSCHICTAGDDSQALIWDLSSM
GQPIEGGLDPILAYTAGAEIEQLQWSSSQPDWVAIAFSNKLQILRV
NT seq
1041 nt
NT seq
+upstream
nt +downstream
nt
atgggggcgagcagcgatccgaaccaggacgggtccgacgaacagcagaggcgttccgag
atctacacctacgaggccccctggcacatctacgccatgaattggagcgttcgcaaggac
aaaaggtaccgtctcgccatcgctagcctcctggaacagtaccccaatcgcgtcgagatt
gttcagctcgacgactccaatggcgagatccgctccgattctaatctctccttcgagcac
ccttaccctcctaccaaagtcatcttcattcccgacaaggaatgccagaagcctgatctc
ctcgccacctccagcgactatcttcgtgtttggcgcgtcgccgatgacaactcccgcgtc
gaaatcaaaactgtcctcaacaacaaccgcaacagcgagttctccggtcctctaacctcc
tttgactggaacgaggctgagcctaagcgcataggcacttccagtatcgacaccacctgt
acaatttgggacattgagagggagaccgttgatactcaactcatcgctcacgacaaggag
gtatatgacattgcatggggaggcgttggcgtcttcgcctctgtctcagccgatggctct
gtcagggtgtttgatcttcgcgacaaggaacactccactattatatatgagagctcggag
ccggatacccctcttgttcgcttgggttggaacaaacaggaccctaggtacatggccaca
atcatcatggacagctccaaagttgttgtactagatatcagattcccaacactgcctgtg
gtggaattacagaggcaccaggccagcgtaaatgctattgcctgggctccccacagctct
tgccacatttgcactgcaggtgatgactcacaggcactcatctgggacctctcctccatg
ggtcagcccattgaagggggattggatcctattctcgcttatactgctggtgctgaaatt
gaacagcttcagtggtcatcctcccagcctgattgggtagccattgcattctcaaacaag
cttcagattctcagggtgtga
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integrated database retrieval system
