Ipomoea triloba (trilobed morning glory): 116023218
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Entry
116023218 CDS
T07384
Name
(RefSeq) transcription initiation factor IIB-2-like isoform X1
KO
K03124
transcription initiation factor TFIIB
Organism
itr
Ipomoea triloba (trilobed morning glory)
Pathway
itr03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
itr00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
116023218
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
itr03021
]
116023218
Transcription machinery [BR:
itr03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
116023218
Prokaryotic type
Archaeal type
TFB
116023218
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Zn_Ribbon_TF
Ribosomal_S27e
A2L_zn_ribbon
DUF7573
Zn_ribbon_3
Zn_ribbon_8
DmmA-like_C
Motif
Other DBs
NCBI-GeneID:
116023218
NCBI-ProteinID:
XP_031120066
LinkDB
All DBs
Position
1:27327763..27331608
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AA seq
189 aa
AA seq
DB search
MADSYCSDCKKNTEVVFDHAAGDTVCSECGLVLESRSIDETSEWRTFADDSGDHDPNRVG
GPVNPLLGDVGLSTVISKGPNSNGDASVARLQNRGGDPDRALVMAFKAIANMADRFAVEG
VFAGGIKQKNMAADGRNRRVLGDIGNMVIFEGMKASSSFLRCLAPSQGLLVHSYWLMQQL
TRTRNVLVL
NT seq
570 nt
NT seq
+upstream
nt +downstream
nt
atggctgactcttactgttcggactgcaagaagaacacggaggtggtgttcgaccacgcc
gccggggacactgtctgctccgagtgcgggctcgtgcttgaatcccgctccatcgacgag
acatctgagtggcgtacgtttgctgatgattctggtgatcacgacccgaaccgtgttgga
ggacccgttaaccccttgctcggcgatgttggcctctccaccgttatttccaagggtccg
aattctaatggcgacgcttctgtcgcccgcttgcagaatcggggcggtgatcctgaccga
gcactcgttatggctttcaaagccatagctaacatggctgatagatttgcagttgaggga
gtctttgctgggggaataaagcaaaagaacatggcggcagatggaaggaaccgccgggta
cttggggatattggcaatatggttatcttcgagggcatgaaggcaagcagcagcttcctc
aggtgtctagccccctcacaagggcttttggtgcacagctactggctaatgcagcagcta
acaagaacaagaaatgttttggtgctgtga
DBGET
integrated database retrieval system
