Ipomoea triloba (trilobed morning glory): 116023245
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Entry
116023245 CDS
T07384
Name
(RefSeq) protein SLOW WALKER 1
KO
K14549
U3 small nucleolar RNA-associated protein 15
Organism
itr
Ipomoea triloba (trilobed morning glory)
Pathway
itr03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
itr00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
116023245
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
itr03009
]
116023245
Ribosome biogenesis [BR:
itr03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
116023245
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UTP15_C
WD40_Prp19
WD40
WD40_CDC20-Fz
WDR55
Beta-prop_EML_2
WD40_WDHD1_1st
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_1st
EIF3I
Beta-prop_WDR75_1st
Beta-prop_EIPR1
Beta-prop_SCAP
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
Beta-prop_RIG_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_C
WDR90_beta-prop_4th
Beta-prop_IFT122_1st
Beta-prop_WDR19_1st
ANAPC4_WD40
NBCH_WD40
WD_LRWD1
Beta-prop_DCAF12
Utp13
Beta-prop_DCAF4
Motif
Other DBs
NCBI-GeneID:
116023245
NCBI-ProteinID:
XP_031120094
LinkDB
All DBs
Position
6:23405591..23407694
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AA seq
530 aa
AA seq
DB search
MAAAMVEDRAFPVKPKLKPNTRKSTSTPESKYWKSFKTPKELPPQTPASGITSIAFSPTS
PYDFAATHSASVSIFSAQTFKRRTISSAFSDTATAAAFRSDGRLLAAGDLSGAVHVFDLK
SRVPLRRLRGHSRPVRVVRYPRADKLHLFSGGDDAVVKYWDVTTETRIYDLLGHKDYVRC
GDCSPVSDDMFISGSYDHTVQVWDVRVMNSGSVMKINHGKPVEDVIYLPSGGLIATAGGN
SVKIWDVIGGGGLLHEMESHNKTVTSLCVGRIGKETGEEANQYRILSVSLDGYMKVFDYS
KFKITHSMRFPNPLLSVAFSPDCSTRVIGTSNGLLYIGKRKAKDSAGEELGSSMGFGAVE
APHRRALRPSYFRYFQRGQNEKPLEGDYLIMRPKKVKLAEYDKMFMKFMHKEALLAALNA
KNPDSVVAVMEELVARKKLLKCVSNLDNEELGLLLKFLQRYLTMPRYAGFLMALAKKVID
LRGEDIKASDALKGHIRNLKRDVEEEIRIQQTLQEIQGIVSPLLKIAARR
NT seq
1593 nt
NT seq
+upstream
nt +downstream
nt
atggcggccgccatggtggaggacagagctttccctgtgaagcctaagctcaaacctaat
actcgcaagtctacgtcaactccagaatccaaatactggaaatcattcaaaaccccaaag
gaactcccgccgcaaaccccagcttccggtataacctccatcgcattctccccgacctcg
ccgtatgacttcgcggccacacactctgcttcggtctccatcttctccgcgcagactttc
aaacgtaggacaatctcctccgccttctctgacaccgccaccgccgccgctttccgctct
gacggtcgcctccttgctgccggtgatctttccggtgcggtccacgtctttgacctaaaa
tcccgggtcccattgcgtcgcctccgcggccactcgcgcccggtgcgcgtcgtccgctat
ccccgggcggacaagctccacctattctccggtggcgatgatgcggttgttaagtattgg
gatgtcactactgagactcgaatttatgatctgttgggccataaggactatgtcaggtgc
ggcgactgctctccagtaagcgatgacatgtttatttccggttcatatgatcatactgtt
caggtttgggatgttagggtaatgaactcaggctcagtgatgaaaattaaccatggaaag
ccggttgaggatgtaatttacttgccatccggggggttaattgcaactgcgggtgggaat
tctgtgaaaatttgggatgttattgggggtggggggttgttgcatgagatggagagtcac
aacaagactgtaacttctctttgcgttgggagaattgggaaagaaaccggagaagaggct
aatcagtatcgcattttgagtgtttctttggatggctacatgaaagtttttgattattcc
aagttcaagattacccattccatgaggttcccaaatccacttttgtcagttgccttctca
ccggattgctctactagggtgattggaacttcaaatggacttctctatattgggaagaga
aaggctaaggacagtgctggtgaagagttggggagttctatgggttttggtgctgtagag
gcacctcataggcgggcattgaggccgtcctattttaggtacttccagagggggcaaaac
gagaagcccttggaaggggattacttgattatgaggccgaagaaggtaaagttggcagag
tacgataagatgttcatgaaatttatgcataaggaggccttgttagctgctttaaatgca
aaaaacccagattctgtggtagctgttatggaggagttggtagccaggaagaaattgttg
aaatgtgtgtcaaatttggacaatgaggagcttggtttgcttttgaagtttcttcagcgg
tacttgacaatgcctagatatgcagggtttttgatggcattggccaagaaagttattgat
ttaaggggtgaggatattaaagcctccgatgcgttgaagggccacattaggaacctaaag
cgagatgtcgaggaagaaattagaatacaacagactttgcaagagatacagggtatagtt
tcccccttgttaaagattgctgcaagaagatga
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