KEGG   Ipomoea triloba (trilobed morning glory): 116023245
Entry
116023245         CDS       T07384                                 
Name
(RefSeq) protein SLOW WALKER 1
  KO
K14549  U3 small nucleolar RNA-associated protein 15
Organism
itr  Ipomoea triloba (trilobed morning glory)
Pathway
itr03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:itr00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    116023245
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:itr03009]
    116023245
Ribosome biogenesis [BR:itr03009]
 Eukaryotic type
  90S particles
   U3 small nucleolar RNA-associated proteins
    116023245
SSDB
Motif
Pfam: UTP15_C WD40_Prp19 WD40 WD40_CDC20-Fz WDR55 Beta-prop_EML_2 WD40_WDHD1_1st Beta-prop_TEP1_2nd WD40_MABP1-WDR62_1st EIF3I Beta-prop_WDR75_1st Beta-prop_EIPR1 Beta-prop_SCAP Beta-prop_WDR90_POC16_2nd Beta-prop_EML Beta-prop_RIG_2nd WD40_MABP1-WDR62_2nd Beta-prop_CAF1B_HIR1 Beta-prop_TEP1_C WDR90_beta-prop_4th Beta-prop_IFT122_1st Beta-prop_WDR19_1st ANAPC4_WD40 NBCH_WD40 WD_LRWD1 Beta-prop_DCAF12 Utp13 Beta-prop_DCAF4
Other DBs
NCBI-GeneID: 116023245
NCBI-ProteinID: XP_031120094
LinkDB
Position
6:23405591..23407694
AA seq 530 aa
MAAAMVEDRAFPVKPKLKPNTRKSTSTPESKYWKSFKTPKELPPQTPASGITSIAFSPTS
PYDFAATHSASVSIFSAQTFKRRTISSAFSDTATAAAFRSDGRLLAAGDLSGAVHVFDLK
SRVPLRRLRGHSRPVRVVRYPRADKLHLFSGGDDAVVKYWDVTTETRIYDLLGHKDYVRC
GDCSPVSDDMFISGSYDHTVQVWDVRVMNSGSVMKINHGKPVEDVIYLPSGGLIATAGGN
SVKIWDVIGGGGLLHEMESHNKTVTSLCVGRIGKETGEEANQYRILSVSLDGYMKVFDYS
KFKITHSMRFPNPLLSVAFSPDCSTRVIGTSNGLLYIGKRKAKDSAGEELGSSMGFGAVE
APHRRALRPSYFRYFQRGQNEKPLEGDYLIMRPKKVKLAEYDKMFMKFMHKEALLAALNA
KNPDSVVAVMEELVARKKLLKCVSNLDNEELGLLLKFLQRYLTMPRYAGFLMALAKKVID
LRGEDIKASDALKGHIRNLKRDVEEEIRIQQTLQEIQGIVSPLLKIAARR
NT seq 1593 nt   +upstreamnt  +downstreamnt
atggcggccgccatggtggaggacagagctttccctgtgaagcctaagctcaaacctaat
actcgcaagtctacgtcaactccagaatccaaatactggaaatcattcaaaaccccaaag
gaactcccgccgcaaaccccagcttccggtataacctccatcgcattctccccgacctcg
ccgtatgacttcgcggccacacactctgcttcggtctccatcttctccgcgcagactttc
aaacgtaggacaatctcctccgccttctctgacaccgccaccgccgccgctttccgctct
gacggtcgcctccttgctgccggtgatctttccggtgcggtccacgtctttgacctaaaa
tcccgggtcccattgcgtcgcctccgcggccactcgcgcccggtgcgcgtcgtccgctat
ccccgggcggacaagctccacctattctccggtggcgatgatgcggttgttaagtattgg
gatgtcactactgagactcgaatttatgatctgttgggccataaggactatgtcaggtgc
ggcgactgctctccagtaagcgatgacatgtttatttccggttcatatgatcatactgtt
caggtttgggatgttagggtaatgaactcaggctcagtgatgaaaattaaccatggaaag
ccggttgaggatgtaatttacttgccatccggggggttaattgcaactgcgggtgggaat
tctgtgaaaatttgggatgttattgggggtggggggttgttgcatgagatggagagtcac
aacaagactgtaacttctctttgcgttgggagaattgggaaagaaaccggagaagaggct
aatcagtatcgcattttgagtgtttctttggatggctacatgaaagtttttgattattcc
aagttcaagattacccattccatgaggttcccaaatccacttttgtcagttgccttctca
ccggattgctctactagggtgattggaacttcaaatggacttctctatattgggaagaga
aaggctaaggacagtgctggtgaagagttggggagttctatgggttttggtgctgtagag
gcacctcataggcgggcattgaggccgtcctattttaggtacttccagagggggcaaaac
gagaagcccttggaaggggattacttgattatgaggccgaagaaggtaaagttggcagag
tacgataagatgttcatgaaatttatgcataaggaggccttgttagctgctttaaatgca
aaaaacccagattctgtggtagctgttatggaggagttggtagccaggaagaaattgttg
aaatgtgtgtcaaatttggacaatgaggagcttggtttgcttttgaagtttcttcagcgg
tacttgacaatgcctagatatgcagggtttttgatggcattggccaagaaagttattgat
ttaaggggtgaggatattaaagcctccgatgcgttgaagggccacattaggaacctaaag
cgagatgtcgaggaagaaattagaatacaacagactttgcaagagatacagggtatagtt
tcccccttgttaaagattgctgcaagaagatga

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