KEGG   Ipomoea triloba (trilobed morning glory): 116023255
Entry
116023255         CDS       T07384                                 
Name
(RefSeq) ras-related protein Rab7
  KO
K07897  Ras-related protein Rab-7A
Organism
itr  Ipomoea triloba (trilobed morning glory)
Pathway
itr04144  Endocytosis
itr04145  Phagosome
itr04148  Efferocytosis
Brite
KEGG Orthology (KO) [BR:itr00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    116023255
   04145 Phagosome
    116023255
   04148 Efferocytosis
    116023255
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:itr04131]
    116023255
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:itr04147]
    116023255
   04031 GTP-binding proteins [BR:itr04031]
    116023255
Membrane trafficking [BR:itr04131]
 Endosome - Lysosome transport
  Rab GTPases and associated proteins
   Rab GTPases
    116023255
Exosome [BR:itr04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   116023255
  Exosomal proteins of other body fluids (saliva and urine)
   116023255
  Exosomal proteins of colorectal cancer cells
   116023255
  Exosomal proteins of bladder cancer cells
   116023255
GTP-binding proteins [BR:itr04031]
 Small (monomeric) G-proteins
  Rab Family
   Rab7/9 [OT]
    116023255
SSDB
Motif
Pfam: Ras Roc Arf GTP_EFTU MMR_HSR1 Gtr1_RagA ATP_bind_1 RsgA_GTPase AAA_16 nSTAND3 Septin AAA_7 AAA_24 cobW ATPase_2 AAA_22 NTPase_1 PduV-EutP AAA_5 NACHT TniB ABC_tran MCM ATP-synt_ab
Other DBs
NCBI-GeneID: 116023255
NCBI-ProteinID: XP_031120103
LinkDB
Position
6:20044727..20047922
AA seq 206 aa
MASRRRMLLKVIILGDSGVGKTSLMNQYVNRKFSNQYKATIGADFLTKEVQFEDRLYTLQ
IWDTAGQERFQSLGVAFYRGADCCVLVYDVNVMKSFENLNNWREEFLIQASPSDPENFPF
VVLGNKVDVDGGNSRVVSEKKAKAWCASKGNIPYFETSAKEGFNVDAAFECIAKNALKNE
PEEEIYLPDTIDVAGGHQQRSTGCEC
NT seq 621 nt   +upstreamnt  +downstreamnt
atggcttctcgccgccgtatgcttctcaaggtcatcatcctcggcgatagcggggttggg
aagacgtcattgatgaaccagtatgtgaaccgtaagtttagcaatcaatacaaagccaca
attggagctgatttcttgacaaaagaggttcaatttgaagataggttgtacacattgcag
atatgggatacagctgggcaggaaaggtttcagagcctaggtgttgcattttatcgagga
gcagattgttgtgttctagtgtatgatgtcaatgtcatgaaatcttttgagaatcttaac
aattggagggaagaatttctaatccaggccagtccctctgatcctgagaacttcccattt
gttgttttggggaataaggtagatgttgatggtggcaatagtcgggtggtttctgagaag
aaagccaaggcatggtgtgcttctaagggaaatataccttactttgaaacatctgcaaag
gaaggattcaacgtggatgcagcttttgaatgcatagccaaaaatgctctcaagaatgaa
cctgaagaagaaatatatctcccagacaccattgatgttgcgggtgggcatcaacaaaga
tcaacaggatgtgagtgttga

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