Ipomoea triloba (trilobed morning glory): 116023282
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Entry
116023282 CDS
T07384
Name
(RefSeq) SWI/SNF complex subunit SWI3D
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
itr
Ipomoea triloba (trilobed morning glory)
Pathway
itr03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
itr00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
116023282
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
itr03021
]
116023282
03036 Chromosome and associated proteins [BR:
itr03036
]
116023282
Transcription machinery [BR:
itr03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
116023282
Chromosome and associated proteins [BR:
itr03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
116023282
PBAF complex
116023282
GBAF(ncBAF) complex
116023282
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIRM-assoc_1
SWIRM
Myb_DNA-binding
ZZ
Myb_DNA-bind_6
Motif
Other DBs
NCBI-GeneID:
116023282
NCBI-ProteinID:
XP_031120133
LinkDB
All DBs
Position
1:complement(29166677..29172095)
Genome browser
AA seq
951 aa
AA seq
DB search
MEEKFKDIGTPPPASFSTPQKAAEAPPSDPPTSRRRGGGQKRKASALGSAGTSTPLSTSS
KRQAREKAPAVPFPPIHNGPCTRARQQPSNAASVASPSNSGVRSEADAALLHRVGGGELR
KTEEVSIEAKEDLEALEAKIEAEFEAIRSRDANAHVVPSHAGWFSWTKVHSLEEQTMPSF
FNGKSPNRTPEMYMEIRNLIMRKYHADPNTRIEVKDLSELSTGVLEARQEVMEFLDYWGL
INYHPFPQPDSAMNVDTNVEEAPKDDSLLDKLFRFESEATWTPVVPRANMTTPALTSGLF
PESTLIEELGKSEGPSVEYHCNSCSGDCSRKRYHCQKQADFDLCTECFNNGKFDRDMAPS
DFILMEPAEAGGASSGKWTDQETLLLLEALELYKENWNEIAEHVATKTKAQCILHFVEMP
IEDMFLDGDNKIDGILNTDVSVNDDNSASKGGPETTESKESKDDGNENQPASSSIEALKP
DDVNDSNAEQEYGENIALKALREAFVAIGSFPSPGERLSFAEAGNPVMALAAFLVKLVEA
NVATASVRSSLKAVSGEQLAARHCFLLEDPPDDKKSSNSDRAVTDSTEPEVQQDEQRNNK
QHEEPNLVNGKIDSSVEQNKENKQAEENNEKGETMEKKKQSEAGESSVKGQGEETLSHCE
HSEKSESRKGTDVKVNDMVVESLHVNGRDEADLQKQETPSTGEGSDTQKSKVEPPSSSTK
ECEDGASVAIPSHSVDSPKDEDMMPATEKKEPEQSMSMVENKVKSTGEEKECKIEKKDAS
NKNDLDIDKIKHAAVTALSAAAVKAKFLAEQEEDQIRKLATSLIEKQLHKLETKLGFFSE
MENTLVRVREQLDRSKQKLFHERAQIIASRFGISGSSARPMSQPLPANKPGMTFPGAAPR
PLTGMGSAIRPPISRPLMASMPAPSSFMPTAVAGSSVQPSNTDKVSSVGNK
NT seq
2856 nt
NT seq
+upstream
nt +downstream
nt
atggaggagaagtttaaagatatcggcactccgccgccggcgagcttctcaaccccgcag
aaggcggcggaggccccaccttcggacccgcccacttctcggcgaaggggcgggggccag
aagcggaaagcaagcgccttaggcagcgctggaacttccactcctctttctacttcctcg
aagcgccaggctcgcgagaaggcgccggcggtgccctttcctccgatccacaacggtccg
tgcaccagagctcgacagcagcccagcaacgccgcttccgtcgcctcaccctcaaattca
ggcgttcgcagcgaggcagatgcggcgctgctgcatagagttggagggggggagctgcgg
aagaccgaggaagtttcaattgaagcgaaggaggatttggaggcgttggaggcaaaaatt
gaagccgaatttgaagcaattaggtctcgagatgctaatgctcatgtggtgccgagtcat
gctggttggttttcttggacaaaagttcattcattggaggagcaaacaatgccgtccttc
tttaatgggaagtctccaaacaggactcctgaaatgtacatggagatacgcaatttgatc
atgagaaagtatcacgcagacccaaacactcgtattgaagtgaaggatttgtctgagctc
tctactggtgtgttggaggcaaggcaagaggtgatggagtttctggactactggggtttg
atcaattaccaccctttcccacaacctgattctgctatgaatgttgataccaatgtagag
gaagcaccaaaggatgattctttactggataagctgttccgctttgaatcagaggcaacg
tggacaccagttgttcccagggcaaacatgaccactccagctctgacatctgggctattt
cccgagtctactttgattgaagaattggggaagtctgagggcccttcagttgagtatcat
tgtaactcctgctcgggtgattgctcccgtaaacgttatcattgccagaagcaggcagat
tttgatttatgtacagaatgcttcaacaatgggaagtttgaccgtgatatggccccctca
gatttcattcttatggagcctgctgaggctggtggtgcaagcagtgggaagtggactgat
caggagacactccttctccttgaagcattagaactttacaaagaaaactggaatgagatt
gctgagcatgttgcaacaaagacaaaagctcagtgcatcttgcattttgttgaaatgcca
attgaggatatgttcttggatggtgataataaaattgatggcattttgaatactgatgtt
tcagtgaatgatgacaattctgcatctaaaggtggtcccgagacaacggagagtaaggaa
tctaaggatgatggaaatgagaatcagcctgcatcctcatcaattgaagctttgaagccg
gatgatgtaaatgattcaaatgctgaacaggaatatggcgagaacattgcactcaaggct
cttagggaagcatttgtagctattggttcttttccttcacctggggaacgtctttcattt
gctgaagctggcaatcctgtaatggcattggcagctttcctggtaaaattggtggaagct
aatgtagctactgcctctgtgcgtagctctttgaaagctgtttctggtgagcaattagct
gccaggcactgttttcttttagaagatcctcctgatgacaagaaatcatccaactctgat
agagctgttactgattcaactgagcctgaagtgcagcaggatgagcagcggaataataaa
cagcatgaagagcctaacttagttaacggtaaaattgattcttctgttgaacagaataaa
gagaataagcaagcagaagagaataatgaaaaaggagaaaccatggagaaaaagaaacag
agtgaagctggggagagcagtgttaagggacaaggagaagaaacactttctcattgtgaa
cattcagaaaaatccgagtccagaaagggaactgatgtaaaggttaatgacatggttgtt
gaatcacttcatgtgaatggaagagatgaagcagatctgcaaaagcaagaaacaccaagt
accggtgaaggttctgatactcaaaaatcaaaagtggagccaccttccagttcaacaaag
gagtgtgaagatggagcgtcagtggccataccatctcattctgtggattctccaaaagac
gaggatatgatgcctgccacagaaaagaaagagcctgagcaatccatgtcgatggttgaa
aacaaagttaaatcaacaggtgaagaaaaagagtgcaagattgagaagaaagatgcttca
aataaaaatgatctcgatattgataagattaagcatgctgcagtcactgctttgtcagct
gcagcagtgaaggcaaagtttcttgcagagcaagaagaagatcaaattcggaagcttgct
acatcattaatagaaaaacagttacacaagctggagaccaagttgggcttcttcagtgag
atggagaacaccttagtaagggttagagaacagttggataggtcaaaacagaaacttttc
catgagagagcacagataattgcaagccgatttggcatttctggatcctcagctcgtccc
atgtcacaaccattacctgccaacaaacctggaatgacttttcctggggcagctcctagg
ccgttaactggcatgggctctgcaataaggccgccaatttcaaggcccctgatggcatca
atgcctgctcccagctcatttatgcccacagcagttgcaggtagttcagtacaaccttca
aacacagacaaggtctcatcggttgggaataagtaa
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