Ipomoea triloba (trilobed morning glory): 116023463
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Entry
116023463 CDS
T07384
Name
(RefSeq) RNA polymerase II C-terminal domain phosphatase-like 1
KO
K18998
RNA polymerase II C-terminal domain phosphatase-like 1/2 [EC:
3.1.3.16
]
Organism
itr
Ipomoea triloba (trilobed morning glory)
Brite
KEGG Orthology (KO) [BR:
itr00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
itr01009
]
116023463
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
itr03021
]
116023463
Enzymes [BR:
itr01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.16 protein-serine/threonine phosphatase
116023463
Protein phosphatases and associated proteins [BR:
itr01009
]
HAD phosphatases
Fcp/Scp phosphatases
116023463
Transcription machinery [BR:
itr03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
116023463
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
dsrm
NIF
DSRM_2
M16C_assoc
Motif
Other DBs
NCBI-GeneID:
116023463
NCBI-ProteinID:
XP_031120325
LinkDB
All DBs
Position
1:3586510..3595144
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AA seq
956 aa
AA seq
DB search
MYKSMEMVRVYEGETLLGEVELYPQNGVVWGGKEIRVSHYSQPSERCPPLAVLHTITSSS
PSGLSFKLESKSPKTQTQDYSPLYVLHSTCLRENKTAVMSLGREELHLVAMQSREYGGVC
PCFWGFIVSPGLYSSCLVMLNLRCLGIVFDLDETLIVANTLRSFEDRIENLQRKINAEAD
PQRVLGMVAEVKRYQEDKSILKQYAENDQVIDNGKVIKCQPEVFPALSDSHQPIVRPLIR
LLDKNIILTRINPLIRDTSVLVRLRPAWEDLRSYLTARGRKRFEVYVCTMAERDYALEMW
RLLDPDSNLISSNELLNRIVCVKSGLKKSLFNVFQDGNCHPKMSLVIDDRLKVWDEKDQP
RVHVVPAFAPYYAPQAEGNNSVPVLCVARNVACNVRGGFFKDFDEGLLQRISDVAYEDDI
KEIPSAPDVSNYLISEDDTTTSNGNKDSLGFDGMSDTEVEKRLKEALSGSATVPLTVPSL
DPRISPAFQYPTLSSSLSIPAPTMHNLGMPLPSQQLPQATPVLKSSLTQVGPQDTSLQSS
PAREEGEVPESELDPDTRRRLLILQHGMDNREHAPGESQLPVRPSVPAPVPRVQPRSWFP
TEEEMGPGQLNRVLPPKDFPLSADSMHMEKHRPHHPPYLHKMDGAVPSDRLVESQMLSKE
AIPSDDRMRLNQSLPRFQSFSGEEVPLARSGNRDLDLEPGRFDSYAETEVGALHDIALKC
GTKLEYRSTLVSSSDLQFNAEAWFAGEKIGVGIGRTRREAQHYAAERSLKNLADKYMSRL
NPDSSSVPGDGIRNGFGNDNCVFGYQSIKEDVLPFSSTSEPLRGLDSKLEASKKSMGSVA
ALRELCTTEGLSLAFQTQPQLSAAPGQKNEIHAQVEIDGEVFGKGIGSTWDEAKAQAAER
ALGALKSTLGQFSHKRQGSPRSLQVFSNKRLKPEYPRFVQRVSSSSKYSKNASAVP
NT seq
2871 nt
NT seq
+upstream
nt +downstream
nt
atgtataaatctatggagatggtgagggtgtatgaaggtgagacacttctgggagaagtg
gaattgtatcctcagaacggtgtcgtttggggtgggaaggaaattcgagtctctcactat
tcgcaacccagtgagaggtgtccaccacttgcagtgcttcacactattacttcttcttct
ccttctgggcttagcttcaaattggaatccaaatctccaaagacacagacacaggactac
tcgccgctctatgttttgcactccacctgtctcagagaaaacaagactgctgttatgtcc
cttggaagggaggagcttcatttggttgcgatgcagtctagggagtatggtggtgtttgc
ccttgtttttggggattcattgtctccccaggactatatagttcttgcctggtcatgctg
aaccttagatgtcttggaattgtatttgatcttgatgaaacactcatagttgccaacact
ctccgttcatttgaagataggatagagaacttgcagcgtaaaataaatgctgaggctgac
ccacaacgtgtattgggaatggtggctgaggtgaagcgttatcaagaagataaaagtata
ttgaagcaatatgctgaaaatgatcaggtcattgataatggaaaagtgatcaaatgtcag
cctgaagtctttccagctttatctgacagtcatcagccaattgttcggccacttattagg
ctacttgataaaaacattattctgacccgtattaatccattgattcgtgatacaagtgtt
cttgtgagattgagacctgcatgggaggatctccgaagctacttgactgcaaggggtagg
aagcgttttgaagtctatgtttgcaccatggctgaaagagattatgctttagaaatgtgg
aggcttcttgatccagattcaaatttaattagctcaaatgagctgttgaatcgtatagtc
tgtgtcaagtctggcttgaagaaatctttatttaatgttttccaagatggaaactgtcat
cctaagatgtcgttggtcattgatgatcgcttaaaagtgtgggatgagaaggatcaaccc
agagtgcatgttgttcctgcctttgctccatattatgctcctcaagctgaaggcaacaat
tctgttcctgtgctgtgtgttgcaagaaatgtcgcgtgtaatgtcaggggtggttttttc
aaagattttgatgagggcctcttacaacgaatttcagatgttgcatatgaagatgatatt
aaagaaataccttctgctcctgacgttagtaactatttgatttcagaggatgatactacc
acttcaaatgggaataaagactcccttggctttgatggcatgtctgatactgaagttgaa
aagagactaaaggaggcactgtcaggttcagcaactgttccattgacagtcccaagcttg
gatcctagaatatctccagctttccagtaccctacgctgtcgtcttcactctcaatccct
gcaccaaccatgcataatcttgggatgcctctccctagtcaacagctacctcaagcgact
cctgttcttaaatcatcattgactcaagtggggcctcaagacacaagcttacagagttct
cctgctagagaagaaggtgaggtaccggaatcagaattggatcctgatactaggaggaga
ctacttattttacaacatggtatggacaacagagagcatgcaccaggtgaatctcagctt
cctgtacggccctctgtaccagcacctgttcctagggttcaaccacgcagttggtttcca
acagaggaagaaatgggtcctggacaactgaaccgagtcctaccacctaaggattttcct
ttgagtgcagattcaatgcatatggagaagcaccgacctcatcatcctccttatctccac
aaaatggatggtgctgttccatctgatagacttgttgaaagccagatgttgtcaaaggag
gcaataccaagtgatgatcgaatgagattgaatcaatcactgcctagatttcaatcattt
tcaggtgaggaagttcccttggcccggtctgggaatagggatcttgaccttgaacctgga
cgatttgattcatatgctgaaacagaagttggagcattacatgatattgcattgaagtgt
ggaacaaagttggagtacaggtcaacattggtttcaagcagtgatctgcagttcaatgca
gaggcctggtttgcgggtgagaaaattggagtaggaattggtagaactagaagggaagca
cagcattatgccgctgagagatctcttaagaatttggctgacaagtacatgtcacgtctt
aacccggattcaagttctgtacctggtgatgggattcggaatggttttggaaatgacaac
tgtgtgtttgggtatcaatcaatcaaggaggatgttcttccattttcatccacgtcagaa
ccacttcgaggtctggactcaaaactggaggcctccaagaagtcaatgggttcagttgct
gcgcttagagagctgtgcacaacggagggccttagtttggcctttcaaactcaaccacaa
ctttcagctgctccaggccagaaaaatgaaatacatgcccaggttgaaatagatggagag
gtgtttggtaagggaattgggtcaacatgggatgaagctaaggcacaggctgctgaaagg
gcccttggagctttaaaatccacgcttggtcagttctctcacaaacgccagggttctcct
aggtcattgcaggtgttctccaataaacggttaaagcctgaatatcctcgatttgtacag
cgggtgtcatcctcttccaagtattcaaagaatgcttctgccgtgccatga
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