Ipomoea triloba (trilobed morning glory): 116023814
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Entry
116023814 CDS
T07384
Name
(RefSeq) serine--tRNA ligase, chloroplastic/mitochondrial
KO
K01875
seryl-tRNA synthetase [EC:
6.1.1.11
]
Organism
itr
Ipomoea triloba (trilobed morning glory)
Pathway
itr00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
itr00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
116023814
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
itr01007
]
116023814
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
itr03016
]
116023814
Enzymes [BR:
itr01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.11 serine---tRNA ligase
116023814
Amino acid related enzymes [BR:
itr01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
116023814
Transfer RNA biogenesis [BR:
itr03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
116023814
Prokaryotic type
116023814
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA-synt_2b
Seryl_tRNA_N
Exo70_C
Motif
Other DBs
NCBI-GeneID:
116023814
NCBI-ProteinID:
XP_031120691
LinkDB
All DBs
Position
6:complement(25256951..25260535)
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AA seq
521 aa
AA seq
DB search
MALQYCFTSSTFKSLKLAALPSLSLFRPIPKTAPLRLIPRHLSPSFPLPHLLRALSVSAV
QSTVADAPTATEDSKAAKPPQWKAAIDFKWIRENKEAVAVNIKNRNSNANLELVLELYER
LLNVQKEVERLRAERNAVANKMKGKLEPTERQKLIDEGKNLKDALVSLEEDLLKLTDELQ
QEAQTIPNMTHPDVPLGGEDCSTLRKMVGKPHEFSFPIKDHVQLGKDLDLLDFDAAAEVS
GSKFYYLKNEAVMLEMALVNWSLTEVMKRGFTPLTTPEIVRSSLIEKCGFQPRGTTTQVY
SIENTDQCLIGTAEIPVGGIHMDSILPESSLPLKYAAFSHCFRTEAGAAGTATRGLYRVH
QFSKVEMFILCRPEESNAYHEELIQIEEDLFTSLGFHFRTMDMASEDLGAPAYRKFDVEA
WMPGLGRYGEISSASNCTDYQSRRLGIRYRPESSSSSANSKKGKNLPPPQFVHTLNATAC
AVPRMIVCLLENYQQEDGSVIIPEPLRPFMGGLQIIKPRLK
NT seq
1566 nt
NT seq
+upstream
nt +downstream
nt
atggcgttgcaatactgcttcacatcatcaaccttcaaatcccttaagctcgccgccctc
ccatcgctttctctcttcagacccattcccaaaaccgcgcctttacgcctaatcccccgc
catttatctccatcttttcctctcccgcacctgctcagagctctctccgtttccgccgtc
caatccaccgtcgcagacgcccctaccgccaccgaggacagtaaagctgcgaagccccct
cagtggaaagccgcgatagatttcaagtggattagggagaacaaagaggctgtggctgtg
aatattaagaaccgaaactccaatgcaaacttggagcttgttctggagttgtatgagcgg
ttgctcaatgttcagaaggaagttgaaaggcttcgtgccgagagaaatgctgttgcaaac
aagatgaaaggcaaactggaaccaaccgagcgccaaaagctcatagacgaagggaagaat
ttaaaggatgcccttgttagtctcgaagaagaccttctgaagcttactgatgagcttcag
caagaagcccagactataccaaatatgacacatccagatgtcccgttggggggagaggat
tgttctactttgcggaaaatggttggtaaacctcatgagtttagcttcccgataaaggat
catgtacagctcggaaaggatttggatttgttagattttgatgcggctgctgaggtcagt
gggtcaaaattttattacttgaagaatgaagcggttatgttagaaatggctctcgtaaac
tggtctctcacagaagttatgaaaagaggctttacaccgctgactaccccagaaattgtc
cggtcctctcttattgaaaagtgtggtttccagccccgcggaactaccactcaggtttac
tccattgagaacaccgatcaatgcctcattggcactgcagagattccggtgggggggatt
catatggattccatacttcccgagtcgtcattaccgttgaagtacgcggctttctcccat
tgcttccgcaccgaggctggtgctgcaggcacggcaacgaggggtctttatcgagttcac
cagttcagtaaggtggagatgttcatattgtgccgaccagaggaaagcaatgcttatcac
gaagagcttattcaaattgaagaagacctcttcacgtccctagggtttcatttcagaaca
atggacatggcatccgaggatctaggcgccccagcttaccgcaaatttgacgtggaggca
tggatgcctggtctgggccggtatggtgagatttccagtgcgtcaaactgtactgactat
cagagccgcagactgggaataaggtatcgcccagaatcatcatcatcatctgcaaattca
aagaagggtaaaaaccttcctcccccgcaattcgtgcacacgctgaatgccactgcgtgt
gccgttccgcgaatgattgtgtgcttgctcgagaattatcagcaagaagatggctctgtt
atcattcccgagcctttacgccctttcatgggtggccttcagataatcaaaccgagactc
aaatag
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