KEGG   Ipomoea triloba (trilobed morning glory): 116024266
Entry
116024266         CDS       T07384                                 
Name
(RefSeq) polynucleotide 3'-phosphatase ZDP isoform X1
  KO
K08073  bifunctional polynucleotide phosphatase/kinase [EC:3.1.3.32 2.7.1.78]
Organism
itr  Ipomoea triloba (trilobed morning glory)
Pathway
itr03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:itr00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    116024266
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:itr01009]
    116024266
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:itr03400]
    116024266
Enzymes [BR:itr01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.1  Phosphotransferases with an alcohol group as acceptor
    2.7.1.78  polynucleotide 5'-hydroxyl-kinase
     116024266
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.3  Phosphoric-monoester hydrolases
    3.1.3.32  polynucleotide 3'-phosphatase
     116024266
Protein phosphatases and associated proteins [BR:itr01009]
 HAD phosphatases
  Other HAD phosphatases
   116024266
DNA repair and recombination proteins [BR:itr03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Other BER factors
     116024266
SSDB
Motif
Pfam: PNK3P zf-PARP Hydrolase_6
Other DBs
NCBI-GeneID: 116024266
NCBI-ProteinID: XP_031121019
LinkDB
Position
1:complement(26293189..26299753)
AA seq 394 aa
MLRTLTISSCSPIGLNPSLLPLILSFSSSSMATPAKVVAEYAKSSKSSCKKCSKAIAASS
LRLGLVSKAPQGFSMTKWHHMECFPLSSDLIPSANAISGFSSLKSSDQEDLAKFISEATV
DEQEVSDKDESAKNESRKRMIIEGLKKSPDLHSPNFIPIEVQETDGKEGTELEEDRIKIA
KTSASIKGPEVEIAFSIVDVKSHYKDAKLLPKWKAFQTTIYLEQDEGILDSEKIAAFDFD
GCLAKTSVKRIGANAWSLMYPSIPEKLQSLYNDGYKLVIFTNESNIERWKNKRQTAVDSK
IGRLEGFIKLVKVPIQVFIACGSSNEPADPFRKPKIGMWNLLKNHFNSGLPIDMDKSFYV
GDAAGRKDDHSDADIKFAEAIGLKFYLPEDFFST
NT seq 1185 nt   +upstreamnt  +downstreamnt
atgctgagaaccctaacaatctcaagctgttccccgattggtctgaaccctagtctattg
cccctaatactctccttctcttcctcctcaatggctacgccggcgaaagtcgtggcagaa
tatgccaagtccagcaagtcgtcctgcaagaaatgctcgaaggcgatcgcagcgagctct
ctccggctggggctggtaagtaaagccccgcaagggttcagtatgaccaagtggcatcac
atggaatgctttcccttgagctccgacctcattccctctgccaatgccatctccggattc
tcgtctcttaagagcagtgatcaagaggatttggcgaaatttattagtgaagctactgtg
gatgaacaggaagtttcagacaaagatgaaagtgccaagaatgaaagcagaaagagaatg
ataatagagggattgaaaaaaagtcccgacctccattccccaaattttatccccattgag
gtacaggaaactgatggaaaggaaggcactgagctagaagaagataggataaaaatagca
aagacatctgcctcaatcaagggacctgaggtggagatagcattctctattgttgatgtg
aagtcccattacaaggatgccaaattattaccaaaatggaaggcgtttcagacaacaata
taccttgaacaggatgaaggaattcttgactcagaaaagattgctgcatttgattttgat
ggttgtcttgcaaagacatctgtaaagagaattggtgcaaatgcttggtctcttatgtac
ccttcaataccagagaaacttcagagcttgtataatgatggctataagctggtaatcttt
accaatgaatccaatatagagcgctggaagaataagaggcagacagctgtggactctaaa
attggtcgacttgaaggcttcattaaactcgtgaaggtcccaattcaggtcttcattgct
tgtggctcaagtaatgaaccagcagatccctttcgtaaaccaaagattgggatgtggaat
cttttgaagaatcacttcaattctggactgccaattgacatggataaatccttttatgtc
ggtgatgctgctggtaggaaggatgatcatagtgatgcagacattaaatttgcagaggcc
attggactgaagttttaccttcccgaggatttcttttcaacttag

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