Ipomoea triloba (trilobed morning glory): 116024857
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Entry
116024857 CDS
T07384
Name
(RefSeq) pumilio homolog 2-like isoform X1
KO
K17943
pumilio RNA-binding family
Organism
itr
Ipomoea triloba (trilobed morning glory)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NABP
PUF
PUF_NOP9
Motif
Other DBs
NCBI-GeneID:
116024857
NCBI-ProteinID:
XP_031121728
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All DBs
Position
7:11573913..11580640
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AA seq
1020 aa
AA seq
DB search
MLSELDRRPMNGTNESSFDDELEKEIGFLLREQRRQEADDLEKELSLYRSGSAPPTVEGS
LSAVGGLFNHGGAGGLGSGASGGARNSTFQEFAWNRTGNGSISEEELRSDPAYLSYYYSN
VNLNPRLPPPLLSKEDWRFAQRLQGGASTIGERRTVNKNDTAASGRSLFSMPPGFNSKKQ
EAENESDNLQGGSVEWGGDGLIGLPGLGLGSKQKSIAEVLQDDFNCTPALGHHSRPASRN
AYDDSGDTLASAETELSNLHHDYSSSDPLRSASNTQVSSAAQHVAPPTSYSYAAALGLSR
STTPDPQHIARAPNPSVTPIGAGRAITSEKRNINSPNSFNGVSSHANEPADLVASLSSMN
LSNVGQSNAKKHAYLKKSESEKQYLASSNGKYMNLQYGDTGPNNTNGSDIQSSAIQADLR
RSSVSSGSSYHKGSLTTSLCGEGDLLSQCPNLDSPNSSFSNYSLNGHSANQLSTQRGNYN
LPPLFENAAAASAMAVPAMDSRMFTGSNLNSASLDQNLGRMENQMAGSGLQAQYMDPMYI
QYLLQFASHNDPSMDRNYLGNSYTDLLQKAYVGSMLSPQKSQYNVPLSSKNIGSGHHGYY
GNPGFRVGLSYPGSLLTSPVIPNSPVGPGSPIRHSDYNMRVGGGMRNFGAGVIGPWNLDN
MENSFASSLLEEFKSNKTKCFELSEIAGHVVEFSADQYGSRFIQQKLETATTEEINMVFQ
EIIPQALTLMTDVFGNYVIQKFFEHGMPSQRRELASKLFGRVLTLSLQMYGCRVIQKVIE
VVDVDQKIKMVEELDGHVMRCVRDQNGNHVIQKCIECVPEDHIQFIVSTFFGQVVTLSTH
PYGCRVIQRVLEHCKDPNTQSKMMEEILGSVSMLAQDQYGNYVIQHVLEHGKPHERTAII
RELAGKIVQMSQQKFASNVVEKCLTFGDPSERQLLVNEMLGTTDENEPLQAMMKDQFANY
VVQKVLETCSDQQRELILSRIKVHLNALKKYTYGKHIVARVEKLVAAGERRMAAQIPNPA
NT seq
3063 nt
NT seq
+upstream
nt +downstream
nt
atgttatctgaattggataggaggccaatgaatggtaccaacgagagctccttcgatgat
gagttggagaaggagataggatttttgcttcgcgaacagcggcggcaagaagccgacgat
cttgaaaaggagctgagtttgtatagaagtgggtcggcgcctccaactgtggagggttca
ttaagtgcggtgggtgggctgtttaaccatggaggggcaggtggtcttggcagtggcgct
agcggcggtgctcgaaactctacctttcaggagtttgcctggaacagaactgggaatggt
tctatatcggaagaggaacttaggtccgatcctgcttacttatcttactattactccaat
gtgaatctcaaccctaggttgcctcctccgctattgtctaaggaggactggcggtttgct
caaagattacaaggtggggcctctacaattggggaaaggaggactgttaacaagaatgat
actgccgcttctgggaggtccctcttctcaatgcctcctggatttaactctaagaagcag
gaagcagagaatgaatctgacaacttacaggggggttcagttgagtggggtggtgatgga
ctcattggtttgcctggactagggctaggtagtaaacagaagagcattgctgaggtactt
caggatgacttcaactgtactcctgcacttggacatcattcacggccagctagccgtaat
gcttatgatgatagtggtgataccctggcttcagctgaaactgaactttctaatcttcat
catgactattcatcctcagatcctttaaggtctgcatcaaatactcaggtttcatctgct
gctcaacacgttgcgccacccacatcatattcatatgctgctgctttaggcttgtcaagg
agcaccactcctgatcctcaacacattgccagggctccaaatccttctgttactcctatt
ggtgctggaagggccatcacatcagaaaaaagaaatattaatagtccaaactcattcaat
ggcgtatcttctcatgcaaatgaacctgcagatctggttgcttctttatctagcatgaac
ctctcaaatgttggtcaaagtaatgcaaagaaacatgcttacttgaagaaatctgaatct
gaaaagcagtatcttgcatcttccaatggtaagtatatgaatttacagtatggtgacact
ggtcctaacaacaccaacgggtcagacattcagtcatctgccatccaagctgaccttcgt
agatcttctgtttcttctggtagctcataccacaaagggtctctgactacttcactctgt
ggtgaaggtgacttgctttctcaatgtccaaatctggacagtccaaattcatccttttca
aattacagtttgaacggccattcagccaatcaactgtctacccaacgtggcaactataat
ttgcctcctttgtttgaaaatgctgctgctgcatctgctatggctgttcctgcgatggac
tcaagaatgtttacaggatcaaatctgaattctgcttctttggaccagaaccttggtaga
atggaaaatcagatggcaggcagtggtctacaggcacaatatatggatccaatgtatatt
caatacttgctacagtttgcttcacataatgatccttccatggacaggaactatcttggt
aattcatatacggacttgcttcagaaagcctatgttggtagtatgctatctccccagaaa
tcacagtataatgttccgctgagtagcaaaaatattggttctggccatcatggatactat
ggtaatcctggatttagagttggtttgtcttatcctggaagtctgttgactagtcctgtc
attccaaactctcctgtaggacctggtagtcctatcagacacagtgattataatatgaga
gttggtgggggtatgagaaactttggtgcgggcgtgattggaccttggaacttggataac
atggaaaacagctttgcatcctctctgctggaagagttcaagagcaacaaaaccaaatgc
tttgagctatcagagattgctggtcatgttgtcgaattcagtgcggatcagtatggcagc
cggttcattcaacaaaaacttgagactgccactactgaggagattaacatggtcttccaa
gaaattattccccaggcacttacacttatgacagatgtctttggcaattatgtaatccag
aagttttttgaacatggaatgccatctcagaggagagaactggctagcaagctctttggg
cgtgttttaacactgagcctccaaatgtatggttgccgagtgatacagaaggtaatcgag
gtggttgatgtggaccagaagattaaaatggtcgaagagcttgatggtcatgtcatgcgc
tgcgtacgtgatcagaatgggaatcatgtaatccagaagtgcattgaatgtgtaccagag
gatcatattcaatttattgtttcaacattttttggtcaagttgtgactctgtccactcat
ccatatgggtgtcgtgttatacagagagtactagaacactgcaaggatccaaacacccaa
agtaaaatgatggaggagattctaggatcagtaagcatgttggcacaggatcagtatggt
aattatgttatacagcatgtactggaacatggaaagccgcacgagcgtactgcgattata
cgggaactagctgggaagattgttcagatgagccagcagaagtttgcctccaatgttgtg
gagaagtgtctgacttttggtgatcccagtgaaagacagctactagtgaatgagatgctt
ggtacaaccgatgaaaacgaacctcttcaggcaatgatgaaagatcagtttgcaaattat
gttgtacagaaagttttggaaacttgtagcgatcagcagcgtgagttgatcctttcacga
ataaaagtgcatttgaatgcattgaagaaatacacatatgggaagcatattgttgctcgt
gttgagaagctcgttgctgctggggagaggaggatggccgcccagatcccaaatccagct
tag
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