Ipomoea triloba (trilobed morning glory): 116025142
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Entry
116025142 CDS
T07384
Name
(RefSeq) YTH domain-containing protein ECT4
KO
K20102
YTH domain-containing family protein
Organism
itr
Ipomoea triloba (trilobed morning glory)
Brite
KEGG Orthology (KO) [BR:
itr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
itr03019
]
116025142
Messenger RNA biogenesis [BR:
itr03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
116025142
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YTH
ANAPC_CDC26
Motif
Other DBs
NCBI-GeneID:
116025142
NCBI-ProteinID:
XP_031122112
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Position
7:2109679..2114000
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AA seq
697 aa
AA seq
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MAAAVAPTADQTSELLQSLSLDTQTKALEIPEPTKKVSVDSTHAANGQIQPADRSLTPLI
PDFMDPTLCYLPNGYPYYYGGYDGTGSEWEGYPRYVNAEGVEMPGVYGDNSSLVYQHGYG
YTPYGPYSPATSPVPTVGHDGQLYSAQHYQYPTPYFQPLTSGPYPTPAAPAKGEIPISAA
AADQATLTVDSANANSNGNANAGGIKGNIGSAPLRPAYQNSSFNMNGSYGRGTMPGGVAS
GYQDPRFAFDGLQSPLPWLDTTFSDGHSRAVNSNSFTPSNRSGIPSSRNQNSRQMGLQHP
RPLSGTNTNYTTNGYMNRMYPNNYYGQYGNTFGSGLVYGSSGYNSRTNNRGWLAADNKFK
PRGRGGGYYGFDNENLDGLNELNRGPRAKGSKNQKGFAPVALAVKGQQIPLTATNDNEKE
NSSLVPDREQYNRSDFPETYSDAKFFVIKSYSEDDVHKSVKYNVWSSTPNGNKKLDEAYK
EAQLKSSGCPVFLFFSVNTSGQFVGVAEMVGPVDFNKKVEYWQQDKWIGCFPVKWHIVKD
VPNSLLKHITLENNENKPVTNSRDTQEVKLEQGLQMIKIFKDHTSKQCILDDFEFYEDRQ
KRIQDKKAKQQLFLKQATEIKAAEEKKKEATNGELKSQIPAEVACEAIKKATPIAQSNGD
IKPSESGSVANSGDLPSTAKVTPSESKSIANGVANGS
NT seq
2094 nt
NT seq
+upstream
nt +downstream
nt
atggctgctgcagttgctcccaccgcagatcaaacttcagaacttctgcaatcgttgtct
ttggatactcagaccaaagcattggaaattcctgagccaaccaagaaggtgtcggttgat
tcaacccatgctgctaatggtcagatccagccggctgatcggtccttgactcccttgata
ccagatttcatggatccaactctgtgctatcttcctaatggttatccatactattatgga
ggatatgatgggacaggcagtgagtgggagggctaccctagatatgtgaatgcagaagga
gttgagatgcctggagtgtatggggacaatagttcacttgtgtatcagcacgggtatggt
tacactccatatggcccttattcacctgctacttccccagtgccaactgtgggacatgat
ggtcagttatatagtgctcaacactaccagtatcctacaccatatttccaacctttgacg
agtggtccataccctactcctgctgcccctgccaaaggtgagataccaatatctgctgct
gctgctgatcaagcaactttgactgtggattctgctaatgctaattctaatggcaatgca
aatgctgggggcataaagggaaatattggatcggctcctttgaggcctgcatatcagaac
tcttccttcaatatgaatgggtcatatggcagaggtaccatgcctgggggcgttgcttca
gggtatcaggatccaagatttgcttttgatgggctacagtctcctctaccatggctagat
actacattttctgatggacattctagggccgtgaatagcaattcttttactccatcaaac
agaagtggcattccatcttcaaggaaccaaaattctcgtcagatgggactgcaacatcca
aggcccttgtctggtaccaacacaaactacacaactaatggatatatgaatagaatgtat
ccaaacaattactacggtcagtatggtaacacctttggatctggcttagtgtatggatca
agtggttacaattcacgtacaaataatcgtggatggttggctgctgacaacaagttcaaa
cctaggggcagagggggtggttactatggttttgacaatgagaacttggatggtttgaat
gagttgaacagggggccaagagccaaaggttccaaaaatcagaagggttttgcaccggtt
gctctggcagttaaagggcaacagattccgttgactgcaacgaatgataatgagaaagaa
aactctagcctggttccagatagagaacagtacaatcgatcagattttcccgagacttac
tctgatgcaaagtttttcgttatcaagtcttacagtgaggatgatgtccacaaaagtgtc
aaatataatgtgtggtccagcacaccaaatggtaacaagaagcttgacgaagcttataag
gaggctcaactgaagtcttctggctgccctgttttccttttcttctcggtaaataccagt
ggacaatttgttggtgttgctgagatggttggtcctgttgatttcaacaaaaaggttgaa
tattggcaacaagacaagtggattggttgtttccctgtaaagtggcacattgtaaaggat
gtccctaacagcttgttgaagcacattactctagaaaacaatgagaacaagcctgtgaca
aacagcagggacactcaagaggttaaattggagcagggcctacaaatgatcaagatattc
aaggaccacacaagcaagcagtgtatccttgatgatttcgagttctatgaggatcgtcag
aaaagaattcaggacaaaaaggccaagcaacagctgttcctgaagcaggcgaccgagata
aaagcagctgaggagaagaagaaagaagctaccaatggggaactcaagtctcaaatacca
gcggaagttgcctgtgaagctatcaagaaagcaactcctattgctcagagtaatggggat
atcaagccgtcagagagtggttcagttgcaaattctggggatcttcctagcactgctaaa
gttacaccatcagagagtaaatccatagcaaatggggttgcaaatggttcttag
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