Ipomoea triloba (trilobed morning glory): 116025241
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Entry
116025241 CDS
T07384
Name
(RefSeq) nuclear pore complex protein NUP214 isoform X1
KO
K14317
nuclear pore complex protein Nup214
Organism
itr
Ipomoea triloba (trilobed morning glory)
Pathway
itr03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
itr00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
116025241
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
itr03019
]
116025241
Messenger RNA biogenesis [BR:
itr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
116025241
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
116025241
NCBI-ProteinID:
XP_031122260
LinkDB
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Position
7:complement(2172793..2192765)
Genome browser
AA seq
2002 aa
AA seq
DB search
MAPPISSSNANAIIKLEEEIEGDQIGSRDYRFCRIGEPVPIKADGISPFDPENEVPPLQP
LAVSERFRLIFVAHSDGFCVARTNEVLASAKEIKDERKELSVQESCIVDISIGLVSILAL
SADESLLAATVGSEINFFPVSTLLLKEQQPSFSFSLNESFIKDMQWAKKEERIYLLLSSE
GKLYCGHGQSQANYVMDNVDAVGWSANGDCVAVARNNVISILSSRFEEKLSLEPSFKLML
SDSDAESVIRVDAVRWVRPDSIVLGCIQVNDDGEETYALQVITGKNGKIDDDSSKPVVLS
FTNVFPDFRSDAVPLASGPHLFFSYLDNHGLAFVANRKNLEQHILLFGWSVGEGTNEAAM
IEILNDSWSPKIEAQESGDDILVLGLAIDKISQQKGLKLLLGEEEKEVSPCCVLLCLAGD
GRLSAFHFASAAGASATSPIFTCFDEKEHTSTVALSDHVASEVQIKDVEGTGMKSKELNI
SESDIKAAGVAQQGTQPSVLSQEDIRTSNQGPKPLLNLGSEDQHKLPVMKPSQDRDGLQS
PVFGKQDENLKHSSVNASQPANPETLGNSLSMKAVHTAVEAKTSIGSASGTSPSVLSQDD
IRTSNQGPKPLLNLGSEDQHKLPVMKPSQDRDGLQSPMFGKQDENLKHSSVNASQPANPE
TLGNSLRMKAVHTAVEAKTSIGSASGTLPSVLSQDDIRTSNQGPKPLLNLGSEDQHKLPF
MKLSQDRVGLQSPMFGKQDENLKHSSVNASQPANPETLGNSLSMKAVHTTVEAKTSIGSA
SVKTSNNYSQSFGKSMQTGHAMGVQGRTQSTGFSNAASFTGTLKSDERSPLQTFGNIQQK
VAGNSDRTTLSLSGGHPQSSPWTQAHSTSVDSSKQKVMPWAESIKSSSLLQQNISLQKPS
KLQPARDASERIPSKQFRSVEEMARKLDDLLEGIEGEGGFMDASIASQENSVITLEKGIQ
ALSDRCRLWRGIMDERQGEIQLLLDKTVKVLAKKVYMEGIFKQATDSRYLDLWSRQKLSS
ELDLKQEHIRDMNKVLTNQLIELERHFNILELNTFGGSDGMQMNRRASQSKHGQGRNVQS
LHSLRDTVNAQLAVAEQLSGSLSKLIADLNIDSSTDRRNVRKELFETIGLSYDDTAYSTP
AKEMVLSTPLNRERSVSFAAKEQSLRKQMDAAKSSEPETARRRRDSLDRSWASFEPSKTT
VKRILLREDHQKVSASRASLSADKQQLNSQSYDRSAAAGSNLFGASSTSFQQFKSTGFPD
ISEKLSSRSPASSQWADALGKPAEQPSSARNFSISPLASSTSFQQFKSTGFADISEKLSS
RSPTSSQWADGLGKPTEQLSSGRNFSISPLAQTKSTVSGQSISRESGKLTNENSTSNTLT
GNLALGHSKFIQQSETKPHLMTNSTLRSESPIPLKVSLDSQNPDGRQLVDTNLTVRDQKN
VPIARGFMPTELKTSSGFSFSPATVTDPAFNLPGNAMASEILLNRSQAGGTSISTSVQSV
SSSLPSKADFSSLSTSSFSSPSVSKFNLPSMSTALFGSPSPAKVSLPSISSTSSPGANTP
TSSSELTSDKFSSILKASSDSNQMISLSQSSGASQTNSAFHFPNFQKVGSSPIIPESKKS
DPKSLSQLPTSNIDSKDDTNSATTPSLPNGTPKTEALTSQPESSIGTSKSPVGFLVQSSS
INGHSENLQSGSQMSSASLSSPTLGVGLNVIQEQSFDAAVSPSTAVSTSQSASGEKNENT
DAFIDEDEMEEVAPETNQATEQTLGNLAGFGIGGPTTVAAAKPNIFGTSLSNNTPTPTSS
TFTMTAPSGELFRPASFSFPSLQPPQPPSLGSFSGGFTTSNVSQAPTGSGFGQPAQIGSG
QQALGSVLGAFGQSRQFGAGLAASGSASASGFGTSFISNNSGGSFGGGFSGVSAVGGGFS
NLASAGGGFAAAATTGAGGFAGAAGAGGFAAAATPTASAFGAAGGGFGGFSSQQGTAAGF
SAFGNSSVAARPPSQLFTQMRK
NT seq
6009 nt
NT seq
+upstream
nt +downstream
nt
atggcgcctccaatctccagctcaaacgccaatgcaatcatcaaattggaagaagagatt
gaaggagatcaaatcggctccagggattatcgcttttgcagaattggagagcctgtcccc
attaaagccgacggcatttcgccatttgatcctgagaacgaggtccctcccttgcagcct
ctcgccgtctccgaacgatttcgcctcattttcgtcgcccactccgacgggttttgtgta
gcgaggaccaatgaagttttggcgtcggccaaagagattaaagatgagaggaaggagctt
tctgttcaggagtcgtgtattgtggatatttctatcggattggtttcgatattggccttg
tctgctgacgagtccttgctagctgctactgtgggtagtgaaatcaacttcttccctgtc
agtaccctactcctcaaggagcaacaaccatcattttcattttccctcaacgaaagtttt
atcaaggacatgcaatgggctaaaaaggaggaaaggatttatctccttctttcaagtgaa
gggaaactgtattgtgggcatggtcaaagtcaggcgaattatgtaatggacaatgttgat
gctgttggatggagtgccaatggtgattgtgttgctgtggcaaggaacaatgtcattagc
atcctgtcatcacggtttgaggaaaagttaagcttggagccatcattcaaattaatgctt
agtgattctgatgctgagtctgttattagagtggatgctgtcagatgggttcgccctgat
agtattgtgctaggatgcattcaagttaatgatgatggtgaggaaacttatgctttgcaa
gtcatcacaggcaagaatggtaaaattgatgatgactcctccaagccagttgttctgtcc
ttcactaatgtgtttccagattttcgttctgatgctgttcctttggctagtggacctcat
ctcttctttagctatttagataatcatgggcttgcatttgttgccaatagaaagaatctg
gaacagcatattttattatttggttggtcagtaggtgaggggacaaatgaggctgcaatg
attgaaattctgaatgatagttggtctccaaaaattgaggctcaagaatctggagatgat
attttggtcttggggcttgccattgacaagatttcccaacagaaaggactcaaactgttg
cttggagaagaagaaaaagaggtttcaccctgctgtgttcttctttgtcttgctggtgat
ggaaggctttcagcttttcactttgctagtgctgcaggtgcctcagctacatcaccaatc
tttacctgttttgatgaaaaagagcatacttctacagtggcgctatctgatcatgttgct
tctgaagttcagataaaagatgtagaaggcacggggatgaaatctaaagaactaaatata
agcgaatcagatataaaagctgcaggagttgctcaacagggtacccaaccatctgtgctt
tcccaagaggatattaggaccagcaatcagggacccaaaccacttctgaacttagggagt
gaggatcagcataaactccctgttatgaagccaagccaagatagggatggattgcaatca
cctgtgtttgggaaacaagatgaaaatttgaaacattcatcagtgaatgcatctcagcct
gcaaacccagaaactctaggtaacagtttaagtatgaaagcagttcatacagcagttgaa
gccaagactagtataggttctgcttcagggacctcaccatctgtgctttcccaagatgat
attaggaccagcaatcagggacccaaaccacttctgaacttagggagtgaggatcagcat
aaactccctgttatgaagccaagccaagatagggatggattgcaatcacctatgtttggg
aaacaagatgaaaatttgaaacattcatcagtgaatgcatctcagcctgcaaacccagaa
actctaggtaacagtttaaggatgaaagcagttcatacagccgttgaagccaagactagt
ataggttctgcttcagggaccctgccatctgtgctttcccaagatgatattaggaccagc
aatcaggggcccaaaccacttctgaacttagggagtgaggatcagcataaactccctttt
atgaagctaagccaagatagggttggattgcaatcacctatgtttgggaaacaagatgaa
aatttgaaacattcatcagtgaatgcatctcagcctgcaaatccagaaactctaggcaac
agtttaagtatgaaagcagttcatacaacagttgaagccaagactagtataggttctgct
tcagtgaaaacctcaaacaattacagccaatcatttggaaaaagtatgcaaacaggacat
gctatgggggtgcaagggaggacacaatcaactggtttttctaatgctgcgtcttttact
ggcaccctaaaaagtgatgaaagatctcccttacaaacctttggtaacattcaacaaaaa
gttgctggtaattctgatagaactacactctctttatctggaggtcatccccaaagttct
ccatggactcaggcccactcaacctcagttgattcttctaagcaaaaagtcatgccttgg
gctgagagcattaagtcatcatctttgttgcagcaaaacatttcattgcaaaagccttca
aagcttcaacctgcaagagatgcttctgaaagaataccgtccaagcagtttcgcagcgtt
gaagaaatggccagaaaactggatgaccttctagaagggatagaaggtgaagggggtttt
atggatgcatccattgctagccaggagaattcagttataactttagaaaaaggcatacag
gctctttctgataggtgcaggctgtggaggggaataatggatgagcggcaaggagagatc
cagctcctccttgataagacagtaaaagttttggcaaagaaagtatacatggagggcatt
ttcaagcaggccactgatagccgatatttggatctctggagtcgccagaaattaagttct
gaacttgacttgaagcaggaacatataagagatatgaacaaggtcttaaccaatcaactc
attgagttggaaaggcacttcaacattcttgaactaaatacttttggcggaagtgatggg
atgcaaatgaatcgtagagcttcccaaagcaagcatgggcaaggaaggaatgtccagtcc
ttgcacagcttacgtgacacagtgaatgcacaactagcagtagcagagcagctctctgga
agcctctcaaaactgatagctgatttgaacatagattcttctacagacaggcgtaatgtt
agaaaggaattgtttgaaacaattggactgtcttatgatgacactgcttacagcactcca
gctaaggaaatggttttgagtaccccattgaacagggaaagatctgtttcttttgctgct
aaagagcagtccttgagaaagcaaatggatgctgcaaagagttctgaaccagaaacagca
aggaggcgtcgagattctttggatcggagctgggctagttttgagccttccaagacaact
gtaaaaagaattctcctgcgagaagatcaccagaaggtaagtgcaagtagagcatctttg
tcagctgataaacagcagctcaattctcagtcatatgatagatcagctgccgctggctca
aatctctttggtgcatcttcaacctcttttcaacaattcaaaagcactggatttccggat
atctcagaaaaactatctagtagaagtcccgcttcttcccaatgggctgatgcccttgga
aaacctgcggagcaaccttcatcagctagaaatttttcaatttcaccactggcatcttca
acctcttttcaacaattcaaaagcactggatttgcagacatctcagaaaaactatctagt
agaagtcccacttcttcccaatgggctgatggccttggaaaacccacagagcaactttca
tcagggagaaatttttcaatttcaccgctggctcaaaccaagtcaactgtttctggtcaa
agcatttctagggaaagtggcaaattaactaatgaaaattcaaccagcaacactcttact
gggaatttggcactaggtcactcaaaattcattcagcaatctgaaaccaaaccacatctg
atgacaaactctactttgcgatcagagtctccaataccactgaaggtttccctggacagt
cagaaccctgatggtagacagctggttgataccaatttaacggtcagagatcagaagaat
gtaccgatagcaagaggatttatgccaactgaattaaagactagttctggcttttccttc
tctcctgcaactgttactgatccagcatttaacctccctgggaatgcaatggcctcagaa
attttgctaaatagaagtcaggctggtggaacctcaatatctacttctgttcaatctgtg
agttcttcgttaccttcaaaagccgatttttcgtcactatctacttcatcatttagttcc
ccatcagtctcaaaattcaatttaccatcaatgtctactgcattgtttggttccccttca
cctgcaaaagtcagtttaccatcaatatcttccacttcttcaccaggagcaaatacacca
acctcatcaagtgaactaacatcagataaattttcatccattttgaaagccagttctgat
tccaatcaaatgatctcactatctcagtcgtcaggtgcttctcaaacaaattctgccttt
cattttccgaattttcagaaagtgggctcatcacccattattcctgagagtaaaaaatct
gatcctaaatcattgtctcaactccctacttccaatattgattcaaaagatgatacaaat
tctgcaacaacaccttcccttccaaatggtacacccaagacagaggctttgacttcacag
cccgagtcatctattggtacatccaagtcaccagttggattcttggtccaatcatcatca
ataaatggacattcagaaaacttacaatctggaagtcagatgagctcagctagcctttca
agtcctaccttgggtgtgggattgaatgtgatacaggaacagtcatttgatgcagcagtt
tctccatcgacagctgtatcaacttctcaaagtgccagtggggaaaagaatgagaatact
gatgcattcatagacgaggatgagatggaagaggtagctcctgagaccaatcaggcaact
gagcagacattaggcaacctagctgggtttggaattggaggtcccactactgtagctgct
gcaaagcctaatatatttggtacctcattgtctaataacactccaactccaacaagctct
accttcacaatgacagctcctagtggtgagctatttagaccagcatcttttagtttccca
tcactacagccaccacagcctccaagccttggtagcttttctggtggctttactaccagt
aatgtaagtcaagctcctactggaagtgggtttggtcaaccagcccaaattggatcagga
cagcaagctttgggatccgtccttggtgcttttggacagtcaagacagttcggtgctgga
ctagctgcaagtggttctgcatctgcgagtggttttggtaccagttttataagcaacaat
tctggtggcagttttggaggtgggtttagtggggtctcggctgtgggtggtggattttct
aatttagcttctgctggcggtgggtttgctgctgctgccaccactggggctggtgggttc
gctggtgccgctggggctggtggatttgctgctgctgcaaccccaactgcaagtgctttc
ggtgctgctggtggtgggtttggaggttttagcagccaacaaggcacagctgcaggcttc
tctgcatttggtaacagttcagttgctgcaagacccccatctcaactcttcacacagatg
agaaaatag
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