Ipomoea triloba (trilobed morning glory): 116025350
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Entry
116025350 CDS
T07384
Name
(RefSeq) ruBisCO large subunit-binding protein subunit beta, chloroplastic
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
itr
Ipomoea triloba (trilobed morning glory)
Pathway
itr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
itr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
116025350
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
itr03019
]
116025350
03110 Chaperones and folding catalysts [BR:
itr03110
]
116025350
03029 Mitochondrial biogenesis [BR:
itr03029
]
116025350
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
itr04147
]
116025350
Enzymes [BR:
itr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
116025350
Messenger RNA biogenesis [BR:
itr03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
116025350
Chaperones and folding catalysts [BR:
itr03110
]
Heat shock proteins
HSP60 / Chaperonin
116025350
Mitochondrial biogenesis [BR:
itr03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
116025350
Exosome [BR:
itr04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
116025350
Exosomal proteins of other body fluids (saliva and urine)
116025350
Exosomal proteins of breast cancer cells
116025350
Exosomal proteins of colorectal cancer cells
116025350
Exosomal proteins of bladder cancer cells
116025350
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-GeneID:
116025350
NCBI-ProteinID:
XP_031122417
LinkDB
All DBs
Position
7:complement(2090229..2095191)
Genome browser
AA seq
608 aa
AA seq
DB search
MASTFAGMSSAGSLAAPSSCMKDNRLAISSNKLSSLASISSSSFGRRKNVVLRKTRPCQI
TAAAKELYFNKDGSAIKKLQIGVNKLSDLVGVTLGPKGRNVVLESKYGAPKIVNDGVTVA
REVELEDPVENIGAKLVRQAAAKTNDLAGDGTTTSVVLAQGLIAEGVKVVAAGANPVLIT
RGIEKTTKALVSELKNMSKEVEDSELADVAAVSAGNNYEVGNMIAEAMSKVGRKGVVTLE
EGKSAENSLRVVEGMQFDRGYISPYFVTDSEKMAVEYDNCKLLLVDKKITNARDLINVLE
SAIRSGYPILIIAEDIEQEALATLVVNKLRGALKVAALKAPGFGERKSQYLDDIAILTGG
TVIREEVGLSLDKADSDVLGHAAKVVLTKDSSTIVGDGSTQEEVSKRVAQIKNLIEVAEQ
DYEKEKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAVEEGIVVGGGCT
LLRLSSKVDALKESLENEEEKVGADIVKRALSYPLKLIAKNAGVNGSVVSEKVLSSDNPK
YGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPEPVMAGNP
MDNSGYGY
NT seq
1827 nt
NT seq
+upstream
nt +downstream
nt
atggcttctacctttgctggcatgtcttcagctggttcattggctgctcctagcagctgc
atgaaggacaacaggctagcaatttcttcaaataagttgtcatctcttgcttctatatct
tcaagctcatttgggaggaggaaaaatgttgttctacgcaaaacacgcccttgccaaata
acagctgcagccaaggagttgtatttcaataaggatggatcagctattaagaaactccaa
attggtgttaataagctttctgatctagttggggtcacacttggtcccaagggaaggaat
gttgttcttgagagcaagtatggtgctccaaaaattgtcaatgatggagttactgtggcc
agagaggttgagctggaggaccctgtggagaacataggtgctaagctggtgagacaagct
gcagccaaaaccaatgacttggcaggggatgggacaacaacatctgttgttcttgcacaa
ggcctaattgctgaaggtgtcaaggttgttgcagctggtgcaaaccctgtcttgatcact
agaggaattgagaagaccacaaaagctttagtgtctgagctgaaaaacatgtcaaaagag
gtggaagacagtgaactagcagatgtggctgcagtgagtgctgggaacaactatgaagtg
ggaaatatgattgctgaagccatgagcaaagttggtaggaagggagtcgtgactctagaa
gaggggaaaagtgctgaaaacagtctacgtgttgtagaaggaatgcaatttgatagaggt
tacatttcaccatactttgtaactgatagtgagaaaatggctgttgaatatgataactgt
aagttactactggttgacaaaaaaataacaaatgcaagggatcttattaatgtgttggaa
agtgccatcagaagtggttatcccattctgataattgctgaagatattgaacaagaagct
cttgcaaccttggtggtgaataaacttaggggtgcattgaaggttgctgctctcaaagct
cctggttttggtgaacggaaatcccagtatcttgatgatatagcaattcttactggagga
actgtaattagggaagaggttggccttagcttagacaaggctgacagtgatgtccttggt
catgctgccaaggtagtcctaactaaggactcttcgacaattgttggcgatggcagcacc
caggaagaagtcagtaagcgtgttgcacagattaaaaaccttattgaggttgcagagcaa
gattatgagaaggaaaagctaaatgaaagaattgcaaaattatcaggaggtgttgctgtc
attcaggttggtgcacaaactgaaacagaactaaaagaaaagaaacttagagtggaagat
gccttaaatgcaacaaaggctgctgttgaggaaggcattgttgttggaggtggatgcact
cttttgaggctttcttcaaaagttgatgcccttaaggagagccttgagaatgaagaggag
aaggttggagcggatattgtcaaaagagcattgagttaccctttgaagttgattgcaaaa
aatgctggtgttaatggaagtgttgttagtgagaaggtgctttcaagtgacaacccaaag
tatggatacaatgctgcgacaggcaactatgaagacttgatggctgctggaattattgat
ccaaccaaggtggtcagatgttgtttagagcatgcttcatctgtggccaagacattcttg
atgtcagactgtgtggtggttgagataaaggagcctgaaccagtcatggccgggaacccc
atggataactccggatatggttactag
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