Ipomoea triloba (trilobed morning glory): 116025503
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Entry
116025503 CDS
T07384
Name
(RefSeq) replication factor C subunit 1
KO
K10754
replication factor C subunit 1
Organism
itr
Ipomoea triloba (trilobed morning glory)
Pathway
itr03030
DNA replication
itr03410
Base excision repair
itr03420
Nucleotide excision repair
itr03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
itr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
116025503
03410 Base excision repair
116025503
03420 Nucleotide excision repair
116025503
03430 Mismatch repair
116025503
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
itr03032
]
116025503
03400 DNA repair and recombination proteins [BR:
itr03400
]
116025503
DNA replication proteins [BR:
itr03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
116025503
DNA repair and recombination proteins [BR:
itr03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
116025503
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RFC1
BRCT
AAA
AAA_lid_RFC1
AAA_22
PTCB-BRCT
RCF1-5-like_lid
Rad17
AAA_5
RuvB_N
nSTAND3
AAA_30
AAA_19
AAA_assoc_2
BRCT_2
AAA_18
Sigma54_activ_2
AAA_17
Zeta_toxin
AAA_14
TsaE
Gp44_lid
AAA_28
RNA_helicase
RsgA_GTPase
AAA_16
NTPase_1
ABC_tran
SurA_N
DNAX_ATPase_lid
Motif
Other DBs
NCBI-GeneID:
116025503
NCBI-ProteinID:
XP_031122600
LinkDB
All DBs
Position
7:551279..559658
Genome browser
AA seq
997 aa
AA seq
DB search
MSDIRKWFMKKHDTSTGNGNASNSAKPSASDKPSSKPEKLDGQESSGRKKTSKYFAKDKA
KEEKEVEESPSKRKAQRDSEELSGHGKPPPGKKAHKAVGDDDDDFVLPTPGKDPANITPS
KKLKSSSGRGVPQKSIDNDNDADDGGSCDGDTKSNLKSSASRRGGKSSLAARTSGRKMDV
DESDDDGSDEKDIKTPKPGGRGRGRGAAATPSSGRGRGGGGRGGFMNFGERKDPPHKGEK
EVPEGAPDCLAGLTFVISGTLDSLEREEAEDLIKRHGGRVTGSVSKKTNYLLCDEDIGGR
KSEKAKELGTVFLTEDGLFDKIRASKKSKTTQEPKKPKDEIRPSPKKESLQKPEAKISVA
TKELTRDTSSARRKVQSSKDTCLPWPEKYRPKTPDELVGNQALVKQLEEWLVHWDDLFLN
ASKVKGKAKKQNDANAKKAVLLSGTPGIGKTTSAKLISRKLGFQAVEVNASDSRGKADSK
IVRGIGGRTSNSIKELVSNESLHAKAGRSPHSKTVLIMDEVDGMSGGDRGGVADLIASIK
ASKIPIICICNDRYSQKLKSLVNHCLLLSFRKPTKQQMAKRLLQIANAEGLQVNQIALEE
LAERVNGDMRMALNQLQYLSLSKSVINYDDIRQRLQASSKDEDMSPFTAVDKLFGFNAGK
LMIDERIGLCMSDPDLVPLIIQENYINYRPSCAPKDANGLQRMNLVARAAESIADGDIVN
VQIRRYQQWQLSQMGSLASSIIPSALLHGSRETLEQGERNYNRFGGWLGKNSTMGKNYRL
LEDLRFHLLASSESILERRSLRLDYMTLLRKKLTDPLRTLAKDEAVENVVDFMDSYSITQ
DDFDSIMEISKFQGHSNPMDGIQPAVKAALTKAYNKGSSSRVIRTADLITLPGLKKAPKK
RVAAMLEPVDENLAEENGDTLQEDEEGNSDAEEDDLLDPEKKVQLDLQNLNSKGIQVDME
IKGSGTSGKKAPAAGRGRGKAPSKAAAEKSSGSKRKR
NT seq
2994 nt
NT seq
+upstream
nt +downstream
nt
atgtcggatatcagaaagtggttcatgaagaaacatgacacaagtactggcaatggtaat
gcctcaaactctgcgaagcccagtgcatcggataaaccttcttcaaaaccagagaaattg
gatggacaagaaagttcaggtagaaagaaaactagcaagtattttgctaaagataaggca
aaggaagaaaaggaggtagaggaatcgccttccaagagaaaggctcaaagagatagtgaa
gaattatctggccatggtaagcctccccctggtaagaaagcccacaaggctgtgggcgat
gatgatgatgattttgtcttgcctactccggggaaggatcctgctaacatcacacctagc
aaaaaattaaaaagcagttctggcaggggtgttccacagaaatctatagataatgacaat
gatgctgatgatggtggcagctgtgatggggatactaaatctaatcttaaatcttctgca
agtaggcgtggtggaaaaagttctttagcagctcgtacaagtgggaggaaaatggatgtt
gatgaaagtgatgatgatggctctgatgaaaaggatattaaaactcctaagcctggtgga
cgaggtcgtggtagaggagcagcagcaacaccctctagtggaagaggtagaggtggtgga
ggacggggtggattcatgaattttggtgaaaggaaagatcctccgcacaaaggagaaaag
gaagtccctgaaggtgctccagactgtttagctggtttgacttttgttatttctgggaca
ctagacagtttggaaagagaagaagctgaggatttgataaagcggcatggtggtcgtgtt
actggatctgttagcaaaaaaacgaattatcttctctgtgatgaagatattggggggcgg
aaatctgaaaaggccaaggagcttggcactgtgtttcttacagaggatggattgtttgac
aagatccgggcatcaaaaaaatcaaagacaacacaagaaccaaagaaacctaaagatgaa
attcgtccttctccgaaaaaagaaagtctgcaaaagccagaagcaaagattagtgtggct
accaaagaacttaccagggacacctcttctgctagaagaaaagtccaatcttcaaaggat
acctgtttgccatggccagaaaaatacagaccaaagactccagatgaattagtagggaac
caggcattggtgaaacagcttgaggaatggctagtacattgggatgatctgttcctgaat
gctagcaaggtgaaagggaaggcaaagaaacagaatgatgctaatgctaaaaaagcagtt
ctattaagtggaacacctggtatagggaagactacttctgcaaagttgatcagtcggaag
ctgggtttccaggctgtggaggttaatgctagtgacagccgtgggaaggctgactctaaa
attgtgaggggtattggtggacgtacatctaattctataaaagaacttgtcagtaatgaa
tctcttcatgctaaagcaggccgctctccacattcgaagactgttttgataatggatgag
gttgatggaatgtctggtggagatagaggtggtgtggccgatcttattgctagcatcaag
gcctctaagatacctataatctgcatttgtaatgaccgctacagtcagaagctaaagagt
cttgtcaaccattgtttactacttagcttcaggaaacccacaaagcaacagatggcaaag
aggttattgcagattgcaaatgcagaaggccttcaagtcaatcagatcgcacttgaggaa
ttggcagaacgagtcaatggtgatatgcgcatggcactgaaccagttgcagtacttgtcg
ctttctaagtctgtaattaactatgatgatatacgacagcgtctccaagccagttcaaag
gatgaagacatgtcaccttttacagctgttgataagttgtttggttttaatgcgggaaag
ttgatgatagatgagcgcattggcttgtgcatgagcgatcctgatcttgtacctctcatt
attcaggagaattatatcaattatcggccaagttgtgctccaaaagatgctaatggatta
caaaggatgaacttggttgctcgtgctgctgagtctatcgctgatggcgatatagttaat
gtacagattcgaagatatcaacagtggcagctctcacagatgggctccttggcatcttca
ataataccttctgctttgttgcatgggtcaagagagacacttgagcagggtgaacgcaac
tacaatagatttggtggttggttgggaaagaactctacaatgggaaaaaattacagactt
ctagaggatttgcgttttcatctcctagcatcctctgaatctatcttggagaggagatct
ttgagacttgactacatgactcttcttcgtaaaaagttgactgatccactaagaacactg
gcaaaggatgaagctgtcgaaaatgttgtggatttcatggattcatactctataacccag
gatgactttgatagcataatggagatatcaaaattccaggggcactcaaatccaatggat
ggaatacagcctgcagttaaagctgcactgacaaaagcatataataaaggaagcagttct
cgtgtgattcgcactgctgatttaatcacccttcctggactgaagaaggccccaaagaag
cgggttgctgcaatgctggagcccgttgatgaaaacctagcagaggaaaatggtgacaca
ctgcaagaagatgaagaagggaactcagacgcagaggaagatgatctactcgatcccgag
aaaaaggtgcagttagatctccaaaatcttaattccaagggtattcaagtcgatatggag
attaagggttctggtacaagtggcaaaaaggcgccagcagcaggaagaggaagaggaaaa
gcaccttctaaagctgctgcagaaaagagcagtggttccaagaggaagagatga
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integrated database retrieval system
