Ipomoea triloba (trilobed morning glory): 116025669
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Entry
116025669 CDS
T07384
Name
(RefSeq) cleavage and polyadenylation specificity factor subunit 3-II
KO
K13148
integrator complex subunit 11 [EC:3.1.27.-]
Organism
itr
Ipomoea triloba (trilobed morning glory)
Brite
KEGG Orthology (KO) [BR:
itr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
itr03041
]
116025669
Spliceosome [BR:
itr03041
]
Other splicing related proteins
Proteins involved in snRNP biogenesis
Integrator complex
116025669
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GFIT
Motif
Pfam:
Beta-Casp
Lactamase_B_6
RMMBL
Lactamase_B
Lactamase_B_2
Anti-Pycsar_Apyc1
Motif
Other DBs
NCBI-GeneID:
116025669
NCBI-ProteinID:
XP_031122846
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Position
7:4590653..4599975
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AA seq
636 aa
AA seq
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MAIDCLVLGAGQEVGKSCVVVTINGKRIMFDCGMHMGFLDHRRYPDFSRISQSGDFTSAL
SCIIITHFHLDHIGALPYFTEVCGYNGPIYMTYPTKALGPLMLEDYRKVMVDKRGEAEQF
TAEHIVECMKKVTAVDLKQTVQVDNDLQIRAYYAGHVLGAAMFYAKVGDAAMVYTGDYNM
VPDRHLGSAQIDRLQLDLVITESTYATTFRDSKYAREREFLQAVHKCVAAGGKVLIPTFA
LGRAQEICMLLDDYWERMNLKVPIYFSAGLTIQANMYYKMLINWTSQKVKSTSTIRNAFD
FKNVCSFDRSLINASGPCVLFATPGMISGGFSLEVFKQWAPCEENLITLPGYCVAGTIGH
RLMSAKTPTRITVEEGIQIDVRCQIHQLSFSPHTDAKGIMDLVKFLSPKHVILVHGEKPK
MATLKERIQSDLQIQCYDPANNETVCIPSTHYIQVDASDKFLKSLLTPNFKFLNRSPRPD
SGPKGMDTRPDPLLQVSDDRISQGVLIMQTNQKSKVVHENELRVALGSEIHEVQFGCCVP
VRIHCSNAPDSTFWLQLLYAKLSSEVAELSVVNNSEHLQVESLVIVVCLKEKCCHRTHAS
TQDMSKSVHFCCTWSLLDEKLAWRIISIMKNLELSM
NT seq
1911 nt
NT seq
+upstream
nt +downstream
nt
atggcaatcgactgtctggttttgggggccggccaagaggttgggaagagctgcgtggtg
gtgacgataaatggaaagcggataatgttcgactgtggcatgcacatgggcttcctggat
catcgccgctatcccgatttctctcgtatctcacagtctggagatttcactagtgccctc
tcttgcatcatcatcacccattttcacttggatcatattggagctcttccatatttcact
gaagtttgtgggtataatggacccatttacatgacgtatcccacaaaagccttgggtccg
ttaatgctagaagattaccggaaagtgatggttgacaaaaggggagaagcagagcaattt
actgcagagcacattgtggaatgcatgaagaaagttacagcagtggatctgaagcagact
gtgcaagttgacaatgacctacagattcgtgcatattacgcggggcatgtccttggagct
gcaatgttttatgctaaggtgggagatgctgctatggtatatacgggagactataacatg
gtacctgacagacatcttgggtctgcccaaattgaccggttacagttggaccttgttatc
actgagtcaacttatgcaacaacttttcgtgattcaaaatatgctcgtgaaagagagttt
ctacaagctgttcacaaatgtgttgctgctggagggaaggtgctcattcctacatttgca
ctgggcagagctcaggaaatatgtatgctattggatgattactgggagcgtatgaatctt
aaagttcctatttatttttcagcagggttgactattcaagctaacatgtattacaagatg
ctcattaactggaccagccaaaaggtgaaaagcacatccaccatacgcaatgcatttgac
tttaaaaacgtctgcagttttgaccgttcattgattaatgcttctgggccttgtgtactc
tttgctacaccgggaatgattagtggaggattttcacttgaagtttttaagcagtgggct
ccatgtgaagagaacctcattacacttccaggatattgtgtagcagggaccatagggcat
cgattgatgtcagctaaaacacccacccgaatcactgttgaagaaggaatccagattgac
gtgcgctgtcagatccatcagctgtctttcagcccgcatactgatgccaagggaattatg
gatcttgtgaaatttctctcccccaagcatgttatccttgtacatggtgaaaagccgaag
atggcaactctgaaggaaagaattcaatccgacttgcaaatccagtgctacgatcctgca
aataacgagacagtgtgtatcccttcaactcactacatacaagtagacgcatctgataaa
tttctcaaaagcttgttaaccccgaacttcaagttcctaaacagaagtccaagaccagat
tctggtccaaagggtatggacacgagacccgatcctctgttgcaagtttctgatgacagg
atttctcaaggagtactaatcatgcagaccaaccagaaatcaaaggttgtgcacgagaac
gagttaagggtagcgctcgggtctgaaatccatgaagtgcaatttggttgctgtgttcca
gtacgcattcattgttccaatgcccccgacagcactttttggctgcagttgttatacgcg
aaattgtcgagtgaagttgcagagttgagtgtggtgaacaatagtgagcatcttcaggta
gaatcattggttattgttgtttgcttgaaggaaaaatgctgtcacagaacgcatgccagc
acacaggacatgtctaaatcagtacatttttgctgtacttggtcactgctggatgagaag
cttgcttggaggatcatctcaatcatgaagaatttggagttgagtatgtaa
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