Ipomoea triloba (trilobed morning glory): 116025957
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Entry
116025957 CDS
T07384
Name
(RefSeq) cell division cycle protein 48 homolog
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
itr
Ipomoea triloba (trilobed morning glory)
Pathway
itr04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
itr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
116025957
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
itr03019
]
116025957
03009 Ribosome biogenesis [BR:
itr03009
]
116025957
04131 Membrane trafficking [BR:
itr04131
]
116025957
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
itr04147
]
116025957
Messenger RNA biogenesis [BR:
itr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
116025957
Ribosome biogenesis [BR:
itr03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
116025957
Membrane trafficking [BR:
itr04131
]
SNARE
SNARE associated proteins
Others
116025957
Autophagy
Aggrephagy
Other aggrephagy associated proteins
116025957
Exosome [BR:
itr04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
116025957
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
RuvB_N
AAA_16
CDC48_2
AAA_2
AAA_33
AAA_5
AAA_22
AAA_14
TIP49
NPHP3_N
RNA_helicase
AAA_28
Mg_chelatase
nSTAND3
AAA_17
AAA_18
Parvo_NS1
ATPase_2
IstB_IS21
ABC_tran
Viral_helicase1
AAA_7
NB-ARC
AAA_24
TsaE
Vps4_C
NACHT
DUF815
AAA_lid_PRS2_C
Zeta_toxin
Zot
Motif
Other DBs
NCBI-GeneID:
116025957
NCBI-ProteinID:
XP_031123236
LinkDB
All DBs
Position
7:complement(15739671..15744861)
Genome browser
AA seq
806 aa
AA seq
DB search
MSHQAESSDSKSTKKDFSTAILERKKAPNRLVVDEAVNDDNSVVALNPATMEKLQLFRGD
TILIKGKKRKDTVVIALADDACEEPKIRMNKVVRANLRVRLGDVVSVHQCPDVKYGKRVH
ILPIDDTIEGVTGDLFESYLKPYFLEAYRPVRKGDHFLVRGGMRSVEFKIIETDPGEYCV
VAPDTEIFCEGEPVRREDEDRLDEVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVK
PPKGILLYGPPGSGKTLIARAVANETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKN
APSIIFIDEIDSIAPKREKTHGEVERRIVSQLLTLMDGLKSRAHVIVMGATNRPNSIDPA
LRRFGRFDREIDIGVPDEVGRLEVLRIHTKNMKLSEEVDLERIAKDTHGYVGADLAALCT
EAALQCIREKMDVIDLEDETIDAEVLNSMAVSNEHFQTALGTSNPSALRETVVEVPNVSW
EDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQ
ANFISVKGPELLTMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQRGSSVGDAGGA
ADRVLNQLLTEMDGMTAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDEDSRHQI
FKACLRKSPISKDIDLRALAKYTHGFSGADITEICQRACKYAIRENIEKDIEREKRRREN
PDSMDEDVEDEMAEIKPAHFEESMKYARRSVSDADIRKYQAFAQTLQQSRGFGTEFRFAE
SGSGGATGADPFATSTAGADEDDLYS
NT seq
2421 nt
NT seq
+upstream
nt +downstream
nt
atgagtcaccaggccgagtcatcggactcaaaaagcactaagaaagacttctctaccgcg
attttggagcggaagaaggcgcctaatcgcctcgtcgttgacgaggcggtcaacgatgat
aactccgtcgttgccctcaaccccgccaccatggagaagctccagctctttcgcggtgac
acaattctgatcaagggaaagaaaaggaaagatacagtggtcattgcccttgctgatgac
gcatgtgaagaacctaagatcaggatgaacaaagttgtccgggcaaatttgagggttcga
cttggtgatgttgtttctgtccaccagtgtccagatgttaagtatgggaaacgtgtgcac
atacttcctatagacgataccattgaaggagtcactggggacctctttgaatcctacttg
aagccttactttttggaggcatatcgccctgtgaggaaaggagaccatttccttgttagg
ggaggaatgagaagtgtggaattcaagatcattgagactgatcctggggagtattgtgtt
gttgctcctgacactgaaatattctgtgagggagagccagtgaggagggaagatgaggat
agacttgatgaagtaggctatgatgatgttggtggtgtgagaaaacaaatggctcagatt
cgtgaattggtggagctgccattgaggcatcctcaacttttcaaatccattggtgtgaag
ccacccaaaggaattttactctatggcccacctggttctgggaagacgctgatagcaaga
gctgttgctaatgaaactggtgcatttttcttctgtatcaatggaccagagattatgtcc
aagttagctggagagagtgaaagcaaccttaggaaggcttttgaagaggctgaaaagaat
gccccttctatcatatttattgatgaaattgattcaattgctcccaagcgggagaagacg
catggtgaagttgagagaagaattgtctcacaactgttgactctgatggatggattgaaa
tcccgtgctcatgttatagttatgggagccacaaaccggcctaacagtattgatcctgct
ctaagaagatttggtaggttcgacagggaaatagacattggtgttccagatgaagttgga
cgccttgaagttcttcgcattcataccaagaatatgaaactttctgaggaggttgatctt
gagagaattgctaaagacactcatggttatgttggtgctgaccttgcagctctctgtact
gaagctgcacttcaatgcattagagaaaagatggatgtcattgatttggaggatgaaaca
attgatgcagaggttttgaattccatggctgtttcaaatgaacacttccaaactgctttg
ggaacaagcaatccttctgctttacgtgagactgttgttgaagtgcccaacgttagctgg
gaagacattgggggccttgaaaatgtcaaacgagaacttcaagagacggttcaatatcct
gtggagcacccagagaagtttgaaaaatttggcatgtcaccttcaaaaggtgttcttttc
tatggtcccccaggatgtgggaaaactcttctggctaaggcaattgcaaatgagtgtcaa
gccaatttcattagtgttaaagggcctgaattgctcacaatgtggtttggagagagtgag
gccaatgttcgtgaaatttttgacaaggctagaggatcagcaccatgtgttctcttcttt
gatgagcttgactcgattgccactcagaggggaagcagcgtcggggatgctggtggtgca
gctgatcgggttcttaaccaacttctaactgaaatggatggcatgactgcgaagaagact
gttttcataattggggctacaaacagacctgacataattgaccctgcactccttcgtcct
ggcagacttgatcaattaatttatatccctctccctgatgaggattcacgccatcagatt
ttcaaggcttgcctgagaaaatctcctatttcaaaagatattgacctgcgagctcttgca
aaatacactcatggatttagtggagctgatattacagaaatctgccagcgagcctgcaaa
tatgccattcgggagaacattgagaaagatatagagagggagaagaggagaagggagaat
cctgattccatggatgaagatgttgaggatgaaatggcagagattaagcctgcacatttt
gaggagtccatgaagtatgctcgtcgcagcgttagtgatgctgatatacgcaagtaccag
gcatttgctcagacgttgcagcagtctcgaggctttggaactgagttccgctttgctgag
tcaggatccggtggtgctactggagctgacccgtttgcgacatccactgccggagccgat
gaagatgacttgtatagttaa
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