Ipomoea triloba (trilobed morning glory): 116026559
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Entry
116026559 CDS
T07384
Name
(RefSeq) probable rhamnogalacturonate lyase B
KO
K18195
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
itr
Ipomoea triloba (trilobed morning glory)
Brite
KEGG Orthology (KO) [BR:
itr00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
116026559
Enzymes [BR:
itr01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
116026559
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Gene cluster
GFIT
Motif
Pfam:
Rhamnogal_lyase
CBM-like
fn3_3
CarboxypepD_reg
EMC7_beta-sandw
CarbopepD_reg_2
RhgB_N
Motif
Other DBs
NCBI-GeneID:
116026559
NCBI-ProteinID:
XP_031123740
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All DBs
Position
8:5223359..5229217
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AA seq
639 aa
AA seq
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MPATTMLSYVEDSYIVVNNGVLQITFTNPGGIITGIQYKGIDNLLELNNPDLNGGFWDLN
WSEAGSRKTRGKFDTIKGTSSKVIVETDEQIELSFTRSWDPSVQGEQAPLIIDRRFIVLR
DSPGFYSYAIFEHSKDLPAFNLNTTRIAFMLNKDKFHYMAVADNRQRFMPGADDRLPGRG
QKLAYPEAVLLVDPVEPEFKGEVDDKYQYSCENKDNKVHGWICFDPPVGFWQITPSNEFR
TGGPFKQDLTSHVNPTTLAIFVTSHYAGEDLLVKFEPGEVWKKVLGPVFIYVNSVHDKAD
ALSLWDDAKERMEKEVQAWPYSFPASEDFPNCDQRGSVCGRLLVQDRYIDKENISANAAY
VGLAPPGDAGSWQREHKGYQFWTTTDENGYFIINNIREGIYNLYASVPGFIGDYKYEVAI
TITAGFEIVLNELVYKPPRDGPTLWEIGVSDRSAAEFYIPDPNPEYINRLYVNHPDKFRQ
YGLWERYTDLYPDEDLVYTVGASDYSKDWFFAQVNRKTGDKMYASTTWQIRFKIDNVDQA
GTYKLRLALASVNHSDLQVRLNDSTADPPLFSTGEIGADNAIARHGIHGIYWLFSVDIPG
TQLVEEENTIFLTQAKSTSPFQGIMYDYIRLEGPESCMP
NT seq
1920 nt
NT seq
+upstream
nt +downstream
nt
atgcctgcgacaactatgctgtcatatgttgaggatagttatattgtagttaacaatgga
gtgctccaaataacattcacaaatccaggggggatcatcacaggaatacaatacaaggga
attgacaacttgctcgagctgaacaacccagatttgaatggagggttctgggaccttaat
tggagtgaagcagggagtagaaaaactcggggaaaatttgatacgattaaaggaactagt
tcaaaggttatagtggaaactgatgagcagattgagctttcgttcacaagatcctgggat
ccatcagtccagggtgaacaagctcccttgatcatagatagaaggtttatagttctccgt
gactccccggggttctactcatatgccatatttgaacactcaaaagacttgcctgctttc
aaccttaacaccaccagaattgccttcatgcttaacaaagacaagttccattatatggct
gttgcagataaccggcaaagatttatgcccggtgcagatgaccggcttccaggaagaggc
caaaaactcgcctatccagaagctgtcctactagttgatcccgtagagcccgaattcaaa
ggagaggttgatgacaagtatcaatattcgtgtgaaaataaagacaataaggtccatgga
tggatttgttttgaccctcccgtggggttctggcaaatcactcctagcaatgaatttcga
acaggagggcctttcaaacaagatctgacctcccacgtgaatccaaccaccctagctata
tttgtcacttcgcattatgctggagaggatcttctggtaaaattcgaacccggagaggtg
tggaagaaagttcttggtcctgtcttcatatatgttaattctgtacatgataaagcagat
gcactatcactctgggatgatgctaaggaacggatggagaaagaagttcaagcttggccc
tatagtttcccagcttctgaagacttcccaaactgtgatcaaagaggctcagtttgcggt
agacttttagtacaagacagatacatcgataaggagaatatatcagcaaacgctgcgtat
gtggggttggccccaccaggagatgctggatcatggcaacgagagcacaagggctaccaa
ttttggactacaacagatgaaaacggctactttatcattaacaacatacgtgaaggaata
tataatctttatgcatcagtccctggatttattggtgattacaaatatgaagttgcaatt
actattacagcaggttttgaaattgtgctgaacgaacttgtttataaacctccaagagac
ggtcccacattgtgggagattggagtgtccgatcgctctgctgcagaattctatattccc
gatcccaatccagaatacataaacagactttacgtgaaccatccagacaaatttaggcag
tatggactgtgggaaagatatacagatttataccccgatgaagatttagtctacacagtt
ggagccagcgactatagcaaagactggttctttgctcaggttaacaggaaaacgggggat
aagatgtatgcaagtactacatggcaaatcaggtttaagattgataacgttgatcaagct
ggaacgtacaaattacgactagctcttgcatctgttaaccattcagatttacaggtccgg
ttgaatgattcaacggccgatcctcctctattctcaaccggagagattggagctgacaat
gccattgcaagacacggcattcacgggatctactggctgttcagtgtggacataccaggc
acacaacttgtcgaagaagaaaatactatatttttaacacaagcgaagagcaccagcccc
ttccaagggattatgtatgactatatccgcttggaaggccctgaatcttgtatgccctag
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