Ipomoea triloba (trilobed morning glory): 116026635
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Entry
116026635 CDS
T07384
Name
(RefSeq) actin-related protein 2/3 complex subunit 1A-like
KO
K05757
actin related protein 2/3 complex, subunit 1A/1B
Organism
itr
Ipomoea triloba (trilobed morning glory)
Pathway
itr04144
Endocytosis
itr04517
IgSF CAM signaling
itr05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
itr00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
116026635
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
116026635
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
116026635
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
itr04131
]
116026635
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
itr04812
]
116026635
Membrane trafficking [BR:
itr04131
]
Others
Actin-binding proteins
Arp2/3 complex
116026635
Cytoskeleton proteins [BR:
itr04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Arp2/3 complex
116026635
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_EML_2
Beta-prop_WDR5
Beta-prop_THOC3
WD40
ANAPC4_WD40
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_WDR3_1st
WD40_Prp19
Beta-prop_CAF1B_HIR1
WDR55
Beta-prop_RIG_2nd
Beta-prop_WDR35_TULP_N
Beta-prop_WDR19_1st
Beta-prop_IFT140_1st
EIF3I
Beta-prop_Aladin
Beta-prop_WDR3_2nd
WD40_Gbeta
Tricorn_2nd
Beta-prop_WDR36-Utp21_1st
Beta-prop_WDR36-Utp21_2nd
Beta-prop_WDR75_1st
Beta-prop_HPS5
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_2nd
RMC1_N
Ge1_WD40
WDR90_beta-prop_4th
Beta-prop_NUP159_NUP214
Beta-prop_EML
WD40_MABP1-WDR62_2nd
eIF2A
Beta-prop_EIPR1
Beta-prop_IFT122_2nd
Motif
Other DBs
NCBI-GeneID:
116026635
NCBI-ProteinID:
XP_031123826
LinkDB
All DBs
Position
8:17621660..17628501
Genome browser
AA seq
379 aa
AA seq
DB search
MAVVSVNQVAQCITCHAWSPDNSMIALCPNNSEVHIYRLLEEKWEKVHVLQKHDQIVSGI
DWSTKSNKIVTVSHDRNSYVWNLEATEWVATLVILRLNRAALCVQWSPKENKFAVGSGAK
TVCVCYYEQENNWWVSKLVRKRHDSSVTNVAWHPNNILLATTSTDGKCRVFSTFIKGVDA
KQSGAGSSSDSKFGEQIIQLDLSFCWSFGVKWSPSGNTLAYVGHNSMIYFVDEIGPSPSA
QTVAFRDLPLRDVLFVSERMVIGVGFDCNPMIFVADERGLWSFLRFLDERKTVSSSPKSQ
FSEAFGIFYSQSKYGANNNSVEQSRTTHENCINCILPLRKTGGHKKSSKSVVTRFSTSGL
DGKVVTWDLGKQEDLSEYL
NT seq
1140 nt
NT seq
+upstream
nt +downstream
nt
atggctgtggtatcagtaaatcaagtcgctcaatgcatcacctgccatgcttggagtcct
gacaactccatgattgccctatgtccgaacaacagtgaagttcacatctatagattatta
gaagagaagtgggagaaggtccatgttcttcaaaagcatgaccaaattgtttcagggata
gactggagtacaaaatccaacaaaatagttactgtttcacatgatcgtaattcatatgtc
tggaaccttgaagcaacagagtgggttgcgacactagttatcctcaggctaaatcgtgct
gctctatgtgtgcagtggagtcccaaagaaaataagtttgctgttggaagtggagctaaa
actgtttgcgtatgctactatgagcaagagaataactggtgggtcagcaaacttgtcagg
aaaagacatgattcttctgtaactaatgttgcctggcatcccaataatattctccttgct
acaacttccactgatgggaaatgcagagtattttctactttcattaaaggcgttgatgca
aagcaatcaggagcagggtcttcttcagattcaaaatttggagagcaaatcattcagctt
gatctctcattttgctggtcctttggtgttaaatggtccccaagtggcaatactttagct
tatgtagggcataattcaatgatttactttgttgatgaaattggtccctctccttctgca
caaactgtagcattccgtgatttgccgcttcgcgatgtgctgtttgtttcagagcgaatg
gtcattggagttggatttgattgtaatccaatgatttttgtggcagatgaaagaggatta
tggagtttcttgaggttcctagatgaaaggaaaacagtatcttcaagcccaaagtctcag
ttttcagaagcatttgggatattttacagccaatcaaaatatggagcaaataacaactca
gttgagcaatcacgaaccacccatgaaaactgcatcaattgcattttaccacttaggaaa
actgggggacataagaaatcttcgaagtctgtggtaacccgtttcagcacttcaggactg
gacggtaaagtagttacgtgggatttggggaaacaagaagatttgtctgagtacctatga
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