Ipomoea triloba (trilobed morning glory): 116026794
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Entry
116026794 CDS
T07384
Name
(RefSeq) nuclear pore complex protein NUP54
KO
K14308
nuclear pore complex protein Nup54
Organism
itr
Ipomoea triloba (trilobed morning glory)
Pathway
itr03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
itr00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
116026794
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
itr03019
]
116026794
Messenger RNA biogenesis [BR:
itr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
116026794
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup54
Motif
Other DBs
NCBI-GeneID:
116026794
NCBI-ProteinID:
XP_031124050
LinkDB
All DBs
Position
8:13135559..13140405
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AA seq
378 aa
AA seq
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MFGAQPSSSAFATPSSTPPFGTPSSTPAFGTPSSTPGFGTPSTPAFGTSLFSSPFSQQSQ
PQQQGSLFQTPQSSSAFSFSTPFGATQSQQNLSASPFGQQPSTQTTSPFANAQLTTQMAP
VAPLPFSLADRDIQAIVDAYKEEPGNPKYAFKHLLFSVTEPQQRVKPAGVSDIMWAEAMG
KLEGMESSNRERLWPQLIQGFKDLSQRLKLQDEVILSDAERLKLTQSNVKMLQRHFQADT
LPWIERMRQKEQGLQRRLLRVMRIIEALEGKGCRLPLMKGEADLAEKLAAITRQLKGSGA
EVSRRVQNLLTICRVQDGIGGGSFYLPGSAKIHEQSLVDMQEVLQQQTEAIARLGNVLKR
DMRDMEIIMAEETEMIED
NT seq
1137 nt
NT seq
+upstream
nt +downstream
nt
atgttcggagctcagccgtcctcctccgccttcgccactccctcctccaccccaccattc
ggaacaccttcgtccaccccagccttcggaaccccttcctccactcctggcttcggcacg
ccttctactccggcattcggaacctcactcttctcctctccgttttctcaacagtcacaa
cctcagcagcagggttctttgtttcagactccccagagctccagcgcattcagcttttcg
acgccgtttggggccacgcagtcacagcagaatctttcagcttcaccgttcggtcagcag
cccagcactcagactacatcacccttcgcaaatgctcaattaaccactcaaatggctcct
gtagctcctctgcccttttctcttgccgatcgagatattcaggcaattgttgatgcttac
aaggaggagcctgggaaccccaagtatgcatttaagcatttgttgttcagtgtaactgaa
cctcagcaaagagtgaaacctgctggtgtatcagatattatgtgggcagaggcgatgggg
aaacttgaagggatggagtcttccaatcgtgaacgcctgtggccccagcttatccagggc
ttcaaggatctttcacagcgtctcaagcttcaagatgaagtcatactttctgatgctgag
aggctaaaattgacccagagcaatgttaaaatgcttcaaaggcattttcaagctgacact
cttccttggattgagaggatgagacaaaaagagcaaggtcttcaaagacgtcttttaagg
gtaatgagaataatagaagcattggaaggtaaaggttgccgattacctctgatgaaagga
gaagctgatttggcagagaagttggctgctataactagacagttaaaaggatcaggagca
gaagtttctcggagggttcagaatctcctcacaatatgccgtgttcaagatggcattggt
ggtggttctttttatcttccgggatcagctaaaatacatgaacagagtcttgttgatatg
caggaggttttgcaacagcaaactgaggccattgctaggcttggcaatgtgctgaagcga
gacatgagggatatggagatcataatggccgaagaaacagaaatgatcgaagattga
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