KEGG   Ipomoea triloba (trilobed morning glory): 116026816
Entry
116026816         CDS       T07384                                 
Name
(RefSeq) transcription initiation factor IIF subunit beta-like
  KO
K03139  transcription initiation factor TFIIF subunit beta [EC:5.6.2.-]
Organism
itr  Ipomoea triloba (trilobed morning glory)
Pathway
itr03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:itr00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    116026816
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:itr03021]
    116026816
Transcription machinery [BR:itr03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIF
     116026816
SSDB
Motif
Pfam: TFIIF_beta TFIIF_beta_N UBR1-like_wing DUF6697 Tau95
Other DBs
NCBI-GeneID: 116026816
NCBI-ProteinID: XP_031124076
LinkDB
Position
8:2998390..3002582
AA seq 301 aa
MSRSMKQIIQTPSSSKSEQSKELEKKIKRSDNTVEEEMEEDDGNVSDTAAAVDTGKADRS
VWLMKCPLVVSKSWQSQAAAASSSADTPLVGKVVVSLDPLKPEESLQFSMEMAGNDAGNI
PKGYSLNMFKDFVPMCIFSESNQAKVAMEGRIEHKFDMKPHTRNMEEYRKMCRERTNKSM
IKNRQIQIIDNDRGVHMRSMPGMLGLIASGSKEKKKATPVKGPEVKRTRRDRGELEDIMF
KLFERQPNWTLKQLVQETDQPAQFLKEILNELCVYNKRGANQGTYELKPEYKKSAEDTGA
D
NT seq 906 nt   +upstreamnt  +downstreamnt
atgtccagatcaatgaagcagataattcagacaccttcatcgtcaaaatcggagcaaagc
aaagaattggagaagaaaatcaaacgatcagacaacacagttgaagaagaaatggaagaa
gacgatggtaacgtcagtgacaccgccgcggcggtagacaccggcaaggctgataggtcg
gtgtggctgatgaagtgtcctctagtcgtctccaagtcgtggcagtctcaggcggcggcg
gcctcctcctccgcagatactccgctagtgggtaaagtcgtcgtttctctcgatcctctt
aagcccgaagaatctctccaattctcaatggaaatggctggaaatgatgctgggaacatc
cctaaaggctactcgttgaatatgttcaaagattttgtgccaatgtgtattttctcagag
tcaaatcaagcaaaggttgccatggaagggagaattgaacataaatttgacatgaagcct
cacactaggaatatggaggaatacaggaaaatgtgtcgtgaaagaacgaataagtcgatg
attaagaacagacagatacagataatagataatgatcgtggtgtgcacatgaggtcgatg
cctggaatgttgggcttgattgcatctggctctaaggagaagaagaaagcaactccagtt
aagggacccgaggtcaaaagaactagaagggaccgtggagagctggaggatatcatgttt
aagctattcgaaagacaacctaattggaccctgaagcagctagtccaagaaacagatcaa
cccgcacaatttttgaaggagatactaaacgagctgtgtgtatacaacaagaggggagca
aaccaaggcacttatgagctgaaacccgagtataagaaatcagccgaggatacaggtgct
gactag

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