Ipomoea triloba (trilobed morning glory): 116026820
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Entry
116026820 CDS
T07384
Name
(RefSeq) protein transport protein SEC16B homolog
KO
K20353
COPII coat assembly protein SEC16
Organism
itr
Ipomoea triloba (trilobed morning glory)
Brite
KEGG Orthology (KO) [BR:
itr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
itr04131
]
116026820
Membrane trafficking [BR:
itr04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
116026820
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_Sec16
Sec16
Motif
Other DBs
NCBI-GeneID:
116026820
NCBI-ProteinID:
XP_031124088
LinkDB
All DBs
Position
8:complement(870087..877239)
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AA seq
1443 aa
AA seq
DB search
MASNPPFQVEDQTDEDFFDKLVDDEDDGDFKAVVPGTVQASFDGNESDEVKAFASLSLSD
SNDNINGNNETDGWETGIGDGGDEGAVIPDDVKPGTLVEENVVKTSDSLDLDPLNSAGLT
SLGECSNGNLADEVASDAAVDKSSGSGHSGVKEVGWSAFNAGSGSNGDSGGFGSYSDFFN
EVGGGAEINMNIESKIVSADPVHDSAYLNTSNSYAHHQQDYDYSAATDPATDGQNLNSSQ
YWESLYPGWKYDPNTGQWYQVDNYEAGANVQGSYDPSLSANWENGKTEISYLQQTAQSAA
GTQTESGTTENVTNWNQVSQANDMVTDWNQASQVNNGYPSHMIFDPNYPGWYYDTIAQEW
RSLDTYARSSQSTIEAENQLNQNGFASSMTFSQNDEQMIHGAFGQADSSSGQQFSSKALA
NNWSGSFGHYNQQTPSTWQTQCIANSEPMQEYKGNQQVENNYGHDYSATNQFSQPMTNNY
EETSIYHGNANQNQSEFPLLARSQGLASPGSFSQQFHQPSIEQNDLKHSSSEYFGNHNSF
NFSQPFQSTQQFTYAPGVERSSAGRPPHALVTFGFGGKLILMKHNSSLGNSSFGNENPVG
GSISVLDLIDIVTERVDSSVGTGTCSYLRTLFRQSFPGPLVGGSVGSKELNKWIDDRIVH
SGSPDLDYRKVEVLRLLLSLLKIGCQYYGKLRSPFGTDTAIKESDSPETAVAKLFASAKS
SVLLNQYGAAIRCVQQLPSEGQMQATATEVQSLLVSGRKKEALQCAQEGQLWGPALVLAA
QLGEQFYGETVKQMALRQLVPGTPLRTLCLLIAGQPAAVFSADTMADGVMPGALNIPQQP
AQFGANGMLDDWEENLAVITANRTKDDELVLIHLGDCLWKERNDIVAAHICYLVAEANFE
PYSDTARLCLVGADHWKFPRTYASPEAIQRTELFEYSKLLGNSQFVLLPFQPYKLVYAHM
LAEVGKISDALKYSQALQKSLKTGRAPEVETLRQLSSSLEERIKTYQQGGFSANLAPSKF
VGKLLNLFDSTAHRVVGGLPPPAPSSINTQANEQIHQSVGPRVSNSQSTMAMSSLVPSTS
MEPISDYANGSKKTFHNRSASEPDFGRSSLQGKVESPPKDASPSTTMQENASGGGTSRFS
RFSFGSQIIQKTVGLVLKSRQGRQAKLGDQNKFYYDEKLKRWVEEGAEPPAEEPTIAPPP
TAASFQNGASDYNLRNAPSEYNLRSALKNEGSSNGTPELKSPSPVDSGSGMPPLPPTSNQ
FSARSRTSVRSRYVDTFNKGGGNATNLFHSPSVPSTKPANPATQKFFVPAPVVSSEQPVD
STIDSTQDIATNNEHPPLSHVNDAFQSPPPPSDMTIQRFGSTGNLSNKLAPAVPGSFQVL
SRRTASWSGALSESTSPEHKSNAKPLGEVPGMPPPSSFMPPDTSLMHSSRSGSFGEDLHE
VEL
NT seq
4332 nt
NT seq
+upstream
nt +downstream
nt
atggcttcgaatcctccatttcaggtggaggatcagacggatgaggatttctttgacaag
ctggtggatgacgaggatgatggtgatttcaaggctgtggtgccggggactgttcaggcc
agttttgatgggaatgaatctgatgaggtcaaggcttttgccagtctgagtttaagtgat
agcaatgataatattaatgggaataatgaaacagatggttgggaaactgggattggagat
ggtggggatgaaggggcagttattcctgatgatgttaaacctgggacattggtggaggaa
aatgtagttaagacaagtgattccttagacttagacccactgaattcggctggtcttact
agtttgggtgagtgtagtaatggaaatttagcagatgaagttgcttctgatgcagcagtt
gataagagcagtggatctgggcattcaggtgtgaaggaggtggggtggagtgcttttaat
gctggttctggttctaatggtgattctggtggttttggatcttactcagacttctttaat
gaagttggtggtggtgctgagataaatatgaatatagagtctaagattgtttcagctgat
ccagtgcatgattctgcatatttaaatacttcaaattcttatgcacaccatcaacaagac
tatgactacagtgcagctaccgatccagctacggatggccagaatctgaatagcagtcag
tattgggaaagtctttatccgggatggaagtatgatccaaatactgggcagtggtatcaa
gtggataactatgaggcaggagctaatgtacaggggagctatgaccctagtttatctgct
aattgggagaatggtaagacagagatttcatatctgcagcaaactgctcagtctgctgca
gggactcaaactgagagtgggacaaccgaaaatgtcactaattggaatcaggtttcacag
gccaatgacatggtgactgattggaatcaggcttcacaagtaaacaatggctacccatca
catatgatatttgatcctaactaccctggctggtattatgatacaattgctcaagaatgg
cgttctctcgacacgtatgctaggtcttctcaatcaaccattgaagctgagaatcagcta
aatcagaatggttttgcttcatccatgactttttcacaaaatgatgaacaaatgattcat
ggtgcttttggacaagctgattccagtagcggtcaacagtttagtagtaaagctctagcc
aacaactggtctggatcttttggtcattataatcaacagacacctagtacatggcaaact
cagtgcattgctaatagcgagcctatgcaagaatacaagggaaaccaacaagtggagaac
aactatgggcacgattattctgctaccaaccagttttctcagccgatgacaaacaattat
gaggaaacaagtatatatcatgggaatgcaaatcaaaatcaaagtgagtttccattatta
gcgaggtcacaaggccttgcttctccgggaagcttcagtcaacaattccatcaaccaagc
attgagcaaaatgatctcaagcattcctcaagtgaatattttgggaatcacaattcattt
aatttctcacaaccatttcaaagcactcagcagttcacttatgctcccggtgtggagagg
tcatctgcagggcgccccccacacgccttggttacttttggttttggtggaaagcttatt
ttgatgaaacataatagttctttaggaaactcctcttttgggaacgagaatcctgtagga
ggttctatatctgtgcttgacttgattgacattgtgactgagagagtggattcgagtgtt
gggactggcacatgcagttatttgcgaactctgttcagacaatccttccctggcccacta
gtaggtggaagcgttggtagtaaggaattgaacaaatggattgatgacaggattgtgcat
tcaggatctcccgatttggattacaggaaagttgaagttttgaggttgctactatctctg
ttaaaaataggttgtcagtattacggaaaactccgttccccatttggtactgatactgca
attaaggaaagtgattctccggaaactgctgtagcaaaactttttgcatctgccaaaagc
agtgtgctactcaatcaatatggtgccgctattcgttgtgtgcaacaattgccgtctgaa
ggacagatgcaggctactgctacagaggttcaaagtcttctggtttctggtagaaagaaa
gaagcattgcaatgtgcacaagagggtcagttatggggacctgctcttgttcttgcggca
caacttggtgagcagttctatggtgaaactgtgaaacaaatggcactacgacaactagtc
cccgggacacctttgaggacattgtgcctactaattgctggtcaaccagctgctgtcttt
tctgcggatactatggctgatggtgtcatgcctggtgctctaaatatccctcagcaacct
gcacagtttggcgcaaatggcatgctagatgattgggaagagaatttggctgtgataact
gctaatagaaccaaggatgatgaactggttctgattcaccttggagattgtttgtggaaa
gagagaaatgatattgttgctgcacacatttgctatctggtggcagaggcaaattttgaa
ccatattcggacactgctaggttgtgtcttgttggtgcagatcactggaaattcccacga
acttatgctagtccagaagccattcagaggaccgaattatttgaatattcaaagcttctt
gggaactctcaatttgttcttcttcccttccaaccgtacaagcttgtatacgctcacatg
ttggctgaggttgggaagatatcggatgcactaaagtacagtcaagcattgcagaaatca
ctcaaaactggtcgagctcctgaagttgaaacgttgagacaactatcgtcctcactggaa
gaaaggataaaaacttaccagcagggtggattctctgcaaatttagccccatcaaaattt
gtgggtaaattacttaacctttttgatagtactgctcaccgtgttgttggcggtctacca
ccacctgcaccttcaagtatcaatacacaagcgaatgaacaaattcatcagtctgtggga
cctagagtctcaaacagccaatcaactatggcaatgtcctcattagtaccttctacatct
atggagccaataagtgattacgctaatggcagtaaaaagacatttcacaatagaagcgcc
tcagaacctgactttggaagaagttccctacagggcaaggttgagtctcctccgaaagat
gcaagcccaagtacaacaatgcaagaaaatgcatcaggaggaggtacgtcacgatttagt
cgcttcagttttggatcccagattattcagaaaacagtgggattagtccttaaatctcgc
caaggccgccaggcaaaattgggtgaccaaaataaattctattacgacgaaaaactcaaa
agatgggtcgaggagggtgctgaaccaccagccgaggaaccaacaattgcacccccacca
acagctgcctctttccagaatggagcatcagattataacttgcggaatgcaccgtcagag
tataacttgcggagtgcactaaagaatgaaggttctagcaatggaactccagaattgaag
agtccatcccccgtggacagtggttcaggaatgccaccacttccacctacttctaaccag
ttttcagcacgtagcagaacgagtgtacggtcaaggtacgtggataccttcaacaaaggt
ggtggtaacgcgacaaatttgttccactccccttccgttccctcaaccaaacctgcaaac
cccgccacccaaaagttttttgttcctgcaccagtcgtctcttctgaacagccagttgat
agtaccattgacagcacacaggatatcgccactaataacgaacaccctcctctctcccat
gtcaatgatgcattccagtctcctcccccaccatcagacatgactattcaaagatttgga
agcacgggaaacctctcaaataagttggcaccagcagtccccggttcctttcaagttctc
tcacggcgaacagcatcctggagtggagctctcagcgagtctacatctcccgaacataaa
tccaacgccaaaccactcggtgaggtcccgggcatgcctccgccgtcatcatttatgccc
cccgacacctctttaatgcactcctcaagaagtggcagttttggcgaggatcttcatgaa
gtcgaactctga
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