Ipomoea triloba (trilobed morning glory): 116027163
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Entry
116027163 CDS
T07384
Name
(RefSeq) vacuolar protein sorting-associated protein 54, chloroplastic
KO
K17600
vacuolar protein sorting-associated protein 54
Organism
itr
Ipomoea triloba (trilobed morning glory)
Brite
KEGG Orthology (KO) [BR:
itr00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
itr01009
]
116027163
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
itr04131
]
116027163
Protein phosphatases and associated proteins [BR:
itr01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
116027163
Membrane trafficking [BR:
itr04131
]
Endosome - Golgi transport
Tethering complex
GARP complex
116027163
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Vps54
Vps54_N
Syndetin_C
Aip3p_Bud6_N
DUF1400
Motif
Other DBs
NCBI-GeneID:
116027163
NCBI-ProteinID:
XP_031124469
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All DBs
Position
8:5950035..5967600
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AA seq
1010 aa
AA seq
DB search
MESQPSLSSGRFEAQESFNSKVSRSTSESNSHSQSLASILNNPHAGKSDTWWWSASASVP
IPEFAALPPPSKPGSDLARPDFVTYLSSISEPYARFHDIQQHTKFESLEGQNGENALVAC
LREVPALYFKEDFQLEEGATFKAACPFRTTTENLVLQEKLSQYLDVVELHLVREISLRSS
SFFEAQGQLEDLNGKIVEGCNRIRELKESIRLLDATLVGSARKVHDLNEQRGDLISLQNK
LRLILYVNQALSTLKLLVASADCAGALDVTDDLQHLLDEDELAGLHCFRHLRDQLAASVE
SINSILSAEFMRTSIHDTGDTDASITSKFKARATIAMNGEGNEVRLDEEESSNFRDRLLP
LVIGLLRTAKLPAVLRMYRDTLTADMKTAIKISVEELLPVLGAQPLDSDFVTGERAGDTD
GGGSSLASRLRSLSPESFVQLLKAVFMIVQAHLARASEVKKAIEWIMCHVDGHYAADSVA
AAIALGAAAAETAQETDSPVSSFLPYSTQRSSNKVSSTQGKGSEASTASNLSRNFRADIL
RENTEAVFAACDAAHGRWAKILGVRSPIHPKLRLQEFLNIYNITQEFITATERIGGRLGY
SIRGTLQSQAKGFLEFQHESRMAKMRAILDQENWAEIDVPDEFQAIVTSFFCSETLVTSE
TATSNGPVAPGSEGSPVDEGLSNSSQNMEQHDSVAVHLDSAAQGNSSGLRRTDSNESGNV
DPESNSAHAVESNSRERGKASPRMLYFNEIGYHMVNCGLILVKMLSEYIDMNNSLSGLSS
EVVHRVVEILKFFNTRTCQLVLGAGAMQVSGLKSITSKHLALASQVISFTYAIIPEIKRV
LFLKVPETRKGLLMLEIDRVAQDFKVHRDEIHSKLVQIMRERLLIHLRSLPQIVENWSRQ
EDTDSQPSQFARSITKEVGLLQRVLSRTLHEVDVQTIFRQVVQIFHTQISEALSRVDIST
PQVKNRMHRDIQHILGCIRSLPSDELSKSNPPNWGKLDEFVAQNFGAEAS
NT seq
3033 nt
NT seq
+upstream
nt +downstream
nt
atggaatcacagccttccctgtcgtcgggaaggttcgaagctcaagagagtttcaactct
aaggtttcgcgatccacctccgaatccaacagccatagccagagcttagcttccattctc
aataatccgcatgcgggaaaatctgacacgtggtggtggtccgcctccgcgtctgtcccc
atccccgaattcgccgctcttccgcctccgtccaagcccggatctgatctcgcccgaccc
gatttcgtcacatacttgtcatctatctccgaaccgtatgcccgtttccatgacatccaa
cagcacactaagtttgagtcccttgaaggccagaacggggagaatgcgctcgttgcgtgc
cttcgggaagtgcctgcgctctacttcaaggaggattttcaattggaggagggtgccacg
ttcaaggctgcgtgcccgttccgaaccacgaccgagaatttggtgctgcaagagaagtta
tcgcagtatttggatgtagtggaactacacttggtgcgggagatttctttgcgctctagc
tccttttttgaggctcaggggcaactggaggacctcaatggtaagatcgttgaagggtgt
aatagaatacgagaactgaaggagtccatacggttgctggatgcaactttggtggggtct
gcaagaaaggtccacgacttgaatgagcagaggggggatttgatttctttgcagaacaag
ttgaggctgattctatatgttaatcaagctctttcaactcttaagttgcttgttgcatct
gccgattgtgctggagctttagatgtaacagatgatttgcagcatttattggatgaggat
gaattagctggtctacactgcttccgtcaccttcgtgatcaattagctgcttcggttgag
tccattaacagcattctttcagcagaatttatgcggacttctatacacgacactggagat
acagatgcatcaataacatcaaaatttaaagctcgagcaactatagctatgaatggagaa
ggaaatgaagttagattggatgaagaagaaagctccaatttccgagatcgactccttcct
cttgttattggattgcttagaactgcaaagctacctgctgtgttgaggatgtatcgcgat
actctcacagctgatatgaaaactgctattaagatatcagttgaagagctgcttccagtt
cttggtgcccaacctctggattctgattttgtcacgggagagcgagcaggggatacagat
ggtggaggctcatcgcttgcaagcaggctgagaagcctgtctcctgaaagttttgttcaa
cttttgaaagctgttttcatgatagtgcaggcccacttggcacgggcttctgaagttaaa
aaagcaattgagtggattatgtgccatgttgatggccattatgctgctgattcagtggct
gctgcaattgcacttggggcagctgctgcagaaacagctcaggaaacagatagtccagtt
agttcctttctgccatattctactcaaagaagcagtaacaaagtttcttcaacccaagga
aaaggtagtgaggcgtcaacagcatcaaatttgtcaagaaatttcagagctgatattttg
agagagaatacagaagctgtttttgctgcttgtgatgctgctcatggtagatgggcaaag
attcttggagtccgttctccaattcatccaaaactaagattgcaggagtttctaaacata
tataacataacccaggaattcataactgcaactgagaggataggtggaaggttggggtat
agcattcgaggaacactacagtcacaggccaaaggttttctagaatttcaacacgagtct
cgaatggcaaagatgagggcaatacttgaccaggaaaattgggctgagattgatgtgcct
gatgagtttcaggccattgtcacatcattcttttgttcagaaactttggttacaagtgag
actgctacaagtaatggtcctgtagccccaggcagtgaaggttcccccgtggatgaaggg
ctctcaaattcatcacaaaatatggagcagcatgattctgttgctgtgcatctggatagt
gcagcacaaggaaattcttcaggtttaaggagaactgactcaaatgagagtggtaatgta
gatcctgaaagtaattcagcacatgctgttgaatcgaactcaagggaacgtggaaaagct
tcacctagaatgctttatttcaatgaaataggatatcacatggttaactgtggcttgatt
ctggtgaagatgctgtcagagtatattgatatgaataatagtttgtctggactttcttca
gaagttgtccatcgtgttgttgagatcttgaaatttttcaacacaaggacttgtcaactt
gtccttggtgctggagctatgcaggtgtcaggcttaaagtctattacttctaagcacctg
gctttggcaagtcaagtaatcagtttcacatatgctattatacctgaaatcaagagggtt
ctattccttaaagtacctgaaacacgcaaaggactgttgatgttagagattgatcgtgta
gcacaggacttcaaggtccacagagatgagatacattcaaagcttgtacagattatgagg
gaacgattgctaatccacctacgcagtttgccacaaattgttgagaactggagtaggcaa
gaggatactgattcacagccgagtcagtttgctcgttctattacaaaggaagtcggtctt
cttcaacgtgtgttatctcgaactctgcatgaagtagatgttcaaactattttcaggcaa
gtggtgcaaatctttcacacccaaatttcagaagcactgtcacgcgttgatatcagtact
cctcaagtgaagaaccgaatgcatcgtgatattcaacatattctcgggtgtatcagatca
ttgccatctgatgaattgagtaaatcaaatccacctaattgggggaagcttgatgaattt
gtggcgcaaaattttggtgcagaagccagttaa
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