Ipomoea triloba (trilobed morning glory): 116027172
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Entry
116027172 CDS
T07384
Name
(RefSeq) eukaryotic translation initiation factor 4G-like isoform X1
KO
K03260
translation initiation factor 4G
Organism
itr
Ipomoea triloba (trilobed morning glory)
Brite
KEGG Orthology (KO) [BR:
itr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
itr03019
]
116027172
03012 Translation factors [BR:
itr03012
]
116027172
Messenger RNA biogenesis [BR:
itr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
116027172
mRNA cycle factors
Stress granule specific factors
116027172
Translation factors [BR:
itr03012
]
Eukaryotic type
Initiation factors
eIF-4
116027172
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MIF4G
MA3
Glyco_transf_7C
TMEM214
CNOT1_CAF1_bind
Motif
Other DBs
NCBI-GeneID:
116027172
NCBI-ProteinID:
XP_031124487
LinkDB
All DBs
Position
8:complement(1090872..1099780)
Genome browser
AA seq
1641 aa
AA seq
DB search
MYQRQHRGKKNEPGTQYKRVPSRPGGSAQLQYKRVSSGKGGGGTGLPPPSLSSSSAASPS
LVYRIVKKSGGEGSQSSLPGGSAESVSGYVQSDAPVSETSGAPTFDATIKPINTYDQEDV
EIASKAQSSQSASGISDTETATTPVKDNTSKEVSVQFGSFGPGVGNGTQVPARTNSAPPD
LNEQKRNKAWHGSSKGVEYFPTTASRQPQPWEVNVQTKDPEPKPRPRKDLHTQISAAPFL
CTMQNSSFIPHPEVSVTMPYQQPHVPMQGGFPRPQLQQQQHPGMPFSSYQMPMQLPGGDN
RQVWQPPFIPGLQPRPLPPQGMMHQGPALNFPPRLDYKPRAQFGGVGGVGASPQYVGKST
APRVKITHPETHEELILVDAKLDGGTARMPSYHNRDSQPQTFYYGPSHARTSFSHMQPNP
FRQSPTSAMLKNSQMPQDLPTLEQKSSGMCSIAVSPNRELISPGLSADRSNGDFLAPMSA
NSSDVKTLMRTMQPNPKKAESQIHSKFSTKSSTFVPRSSVQSSMIPSHDAAFIEKNIGVR
RERAFQGVDSHANQLNKSSKTAPVHSEQSQHDGSASEEPEHARRAILSANASIYVVSAAN
DLQVGHATANESPQCNVVINTNNKALKTEKQDDDSPSDIPAERIKASSKHSKANGVEQCS
LDDNGKGEDIHGSRERNFLASGSLESRCQPLNVSEVLLSDSESKQPMSGQSLNPSSPTSP
FKAKGKAFEEVNLDHSPVSNPNRAKSAFSRRRDKRKEIVKKADGDLCMACKSPKKKLEPP
DSSVSLQVSSSGSFEEDATTNQDYRSKTETDYWKNELVFHHNKAKHPEDGKKRYSPDFLI
TLSSNFTNLPTDFKLASDVENLLWSNAITPKVVKHSPKGTSPSNAQTVSRTGGSSRLEYR
AISVTDNVRRTKSQATFASGLEPCNGANRSANNNGIRPGQRGNYDVGRNLRVHAPMQRNS
RNGNKWQRAPRSVKGPSPQSPLHRAQKKYEVRKANDVEEGKQRQLKAILNKLTPQNFERL
FQQVKDVSIDNAATLAGVISQIFDKALMEPTFCEMYVDLCYHLSSELPDFVEDDQRITFK
RLLLNKCQEEFERGEREQAEAEKMEGDGEFKQSDQEREEKRIQARRRMLGNIRLIGELYK
NKMLTERIMHECIQKLLGDYQNPDEEDVEALCKLMCTIGEMIDHAKARDQMDTYFEILSN
LANNTDLSSRLRFMLMDVIDLRKNNWQQRRKVEGPKKLEELHRDAHQERQGHQTNRFTRA
PNNIPSPRRGHPPDIDNHATTMLSTSQINAVHGMPSHIHGFGGQDVRLEDKHLHEGQASS
FPLPHTSINDNTIYLDPWGISASGPLMLSVSPPTDINSGFGETIIIQGGPGGYSPVSELL
PYNIRQEPISRYSMESFVRPSVYDHSIQQGNVLFASRDAANLNCSFGRSSELSSACLQTH
PFAPNPITEKVLPEERLAELSISAIREFYSAVDENEVVLCIRELNSPSFIPTLISLWVSD
SFERKDRDRILLSRLLVNLTKSRGIMDSGQLISGFESVLATLEDAITDAPKAAAFLGSMF
GTMIIENVVSLEKIGNLLRESIKKPGHLQIGLAHEVLENTFAMIRSVKGESFLREICLSS
KIELDDFAPRNLPSQLVSQSG
NT seq
4926 nt
NT seq
+upstream
nt +downstream
nt
atgtaccagaggcagcacaggggtaagaagaacgagccagggacacagtacaaaagggtg
ccgagtcgacccggagggtcagctcagttacagtataaaagggtttcttctggaaagggt
ggtggtggcacaggcctacctcctccttccctgtcttcctcctctgcagcttccccttcc
cttgtctatagaattgttaagaagtctggtggagaagggagtcaatcaagtttacctggt
ggtagtgcagaatcagtgtctggttatgtgcaaagtgatgccccagtatctgaaacttct
ggtgctccaacctttgatgctaccatcaagccaatcaatacatatgaccaggaagatgtt
gaaattgcttccaaggctcaatcctcccaatctgcatctggaatctcagatacagaaacc
gctacgacccccgtgaaagataacacttcaaaggaagtgtctgtgcagtttgggagcttt
ggcccaggcgttgggaatggcacacaggttcctgcaagaaccaactcagcgccacccgac
ttgaacgaacagaaaaggaataaggcatggcatggatcctctaaaggtgttgagtatttt
cccactactgcttctaggcagccacagccatgggaggttaatgtgcagacaaaggaccct
gagcctaaaccgcggcctagaaaagatcttcacactcagatttcagctgcaccttttcta
tgtacaatgcagaattcatcttttattcctcatcctgaggtttcagtcactatgccatat
cagcaaccacatgttcctatgcaaggcggttttccccgcccacagctgcagcagcagcag
catccaggaatgccgttttcttcatatcagatgcctatgcagttaccaggtggagataat
cgtcaagtttggcaaccaccatttattcccggtttgcaacctcgtcccttgccgcctcaa
gggatgatgcaccagggtccagctctaaactttcctcccagacttgattacaagccgcgt
gctcagtttggtggtgtggggggtgttggagcatcgccgcagtatgttgggaagtctact
gcacctagagtaaaaattactcatcctgaaacccatgaagagttaatacttgttgatgca
aaactggatggtggaacagctaggatgccatcttatcataatagggattctcaaccacaa
acattctattatggtccttctcatgcaaggacttccttctctcatatgcagccaaatcct
ttcaggcaaagccctacttctgctatgttgaaaaattctcagatgcctcaagatcttcca
acattggaacagaaatcttcagggatgtgcagtattgctgtttcaccaaacagggaactg
atttctcccggtttgtcagctgacagatctaatggagattttctggctccaatgtcagct
aactcatctgatgtcaagacactaatgaggacaatgcagcctaatcccaaaaaagctgaa
tcacaaattcattcaaaattttctactaagtcatcaacatttgttcctagatcttctgtt
caatcatctatgattccctctcatgatgctgcattcatagaaaagaatattggtgtcaga
agagagagagctttccagggtgtggattcacatgcaaatcagttgaataaatctagcaag
acagctccggtacattctgaacaatcacaacatgatggctcagcaagcgaagagcctgaa
cacgcgaggcgagcaattttgagtgctaatgcaagcatttatgttgtttctgctgccaat
gatcttcaagttggtcatgcaactgcaaatgaatctccacaatgtaatgttgtaatcaac
acaaataataaagctcttaaaacagaaaaacaggatgatgattctccatcagacattccg
gcagaaagaattaaagcatcatcgaaacattcaaaggccaatggggtggaacaatgctcc
ctggatgataatggcaaaggagaagatatacatggttctagagagagaaattttttagca
tctggttctcttgaaagtagatgtcaaccattgaatgtcagtgaagttctgttatctgat
tctgaatcaaagcaacctatgagtggtcaaagtcttaatccctcatcaccaacgtcgcct
ttcaaagccaaggggaaagcttttgaggaagtaaaccttgatcatagtcctgtatcgaat
ccgaatagggcgaaaagtgcattctccagacgcagggataaaagaaaagaaattgtaaag
aaagctgatggtgatctatgtatggcatgcaagtcccctaagaagaaattggagcctcct
gattcttcagtaagtttacaagtatcctcctcaggttcctttgaagaagatgctacaacc
aatcaagattataggagtaaaactgaaacagattactggaaaaatgagttggtgtttcac
cataataaggctaagcatcctgaagatggcaaaaagaggtactcaccggatttcctcata
acgctctcttcaaactttaccaaccttcccacagatttcaagcttgcaagtgatgtggaa
aacctactgtggtctaatgccatcactccaaaagttgtcaagcacagtccaaaaggaacc
agcccaagtaatgcacaaactgttagcaggactggtggtagttctcggcttgagtatcgt
gctattagtgtgacagataatgtcaggaggacgaaatcacaagctacttttgcttctgga
cttgaaccctgtaatggtgccaacagaagtgctaacaataatgggattcgacctggtcaa
cgaggaaactatgatgttggaaggaaccttcgggttcatgcaccaatgcaacgtaattcc
cgtaatggaaataaatggcagcgtgctcctcgctctgtaaaaggtccgagtcctcaatct
ccactgcacagagctcagaagaaatatgaggtgaggaaagccaatgatgttgaggagggg
aaacagagacagctgaaagctattcttaataagttgactcctcaaaattttgagaggctg
tttcagcaagtgaaggatgtttctatagacaatgctgccactcttgctggtgtcatttca
cagatatttgacaaagccctgatggaaccaacgttctgtgagatgtatgttgatttgtgt
tatcatctttccagtgagcttcctgattttgttgaggatgatcagagaatcacctttaag
agattgcttctaaataaatgccaggaagaatttgaaagaggagaaagagaacaggctgaa
gcagagaaaatggaaggggatggagagttcaaacagtctgatcaggaaagagaagaaaag
aggatacaagcaaggaggaggatgttaggaaatataagattgattggggaattatacaag
aacaagatgctgacagaaaggatcatgcatgagtgtatccagaaattgctgggagattac
cagaatccggatgaggaagatgttgaggctctctgcaagctaatgtgcacaataggtgaa
atgatagaccatgccaaagccagggatcaaatggacacatattttgaaatactgtcaaat
ttggcaaacaacacagatttatcttctagactaaggttcatgttgatggatgtaattgac
ttgagaaaaaataattggcagcaaagaaggaaagttgaaggccccaaaaaacttgaagaa
ttacatagggatgcacatcaagagcgacaaggtcatcaaaccaatcgatttactcgtgct
ccaaacaacattccttctcctagaaggggacatccaccggacatcgataatcatgcaaca
actatgttatcgacatcccaaataaatgcagttcatggaatgccatcgcatattcatgga
tttggaggtcaggatgtgaggctggaagacaaacatttacacgagggccaggcttcttct
tttcccctgcctcacacgtctatcaatgacaacactatttatcttgacccttggggaata
tctgctagtggaccactaatgctttctgtttcccctcccacagacataaatagtggtttt
ggagagaccattataatccaaggtggtcctggtggttatagtcctgtatctgaactgtta
ccttataatataagacaagagccaatatcccgatatagtatggagagttttgtgaggcct
tctgtatatgatcattccattcaacaaggcaatgtgctttttgcaagtagagatgcagcg
aatttaaattgttcatttgggagatccagtgaactttcctcagcttgtctgcaaactcat
ccttttgcaccaaatcctataactgagaaggtattgcctgaagaacgtcttgcagaacta
tccatctctgcaattcgagaattttacagtgctgtggacgagaatgaagttgttctctgt
attagagaattgaactcgccaagttttattccaacactgatatcgttatgggtaagtgac
tcgtttgagaggaaagacagagacaggattctcctttctaggctccttgtcaatcttacc
aagtccaggggaataatggactctgggcagctcatttctgggtttgaatcagttttagct
actttggaggatgctataactgatgcaccaaaagcagcagcttttcttggctccatgttt
ggtacaatgatcattgagaatgttgtctctctcgaaaaaatcggaaatcttttaagagaa
agcatcaagaaacctggccatcttcaaattgggcttgctcatgaggttcttgagaacaca
tttgcaatgataaggtcagtgaagggagaatcattcttgagagagatctgtctgagctcc
aaaatagaattggacgatttcgcccctcggaacctcccaagccaacttgtgtctcagtca
ggttga
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integrated database retrieval system
