Ipomoea triloba (trilobed morning glory): 116027272
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Entry
116027272 CDS
T07384
Name
(RefSeq) probable rhamnogalacturonate lyase B
KO
K18195
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
itr
Ipomoea triloba (trilobed morning glory)
Brite
KEGG Orthology (KO) [BR:
itr00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
116027272
Enzymes [BR:
itr01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
116027272
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Motif
Pfam:
Rhamnogal_lyase
CBM-like
fn3_3
CarboxypepD_reg
Motif
Other DBs
NCBI-GeneID:
116027272
NCBI-ProteinID:
XP_031124651
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Position
8:5231304..5236098
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AA seq
641 aa
AA seq
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MSTAAVQLIQQDDQVVVDNGIFQLRLTNPGGTIVGIQYGGIDNLLELSNPSLNGGFWDLN
WSEAGSSGTRGKFDTIEGTSFQVITFSDEVVELSFTRKWDPSLQGEHSPLSIDKRFIILQ
GSSGFYSYAIYEHTQDMPAFNLNETRIAFMLKIEKFHYMAMADDRQRFLPLPEDRLPPRG
EELAYPEAVLLVDPVEPEFKGEVDDKYQYSCENKDDKVHGFICFDPPVGFWQITPSNEFR
TGGPIKQDLTSHVNPTTLAMFVSTHYGGEDLVIKFAPGEPWKKVFGPVFIYLNSVVDRDD
AYSLWDDAKEQMKNEVQSWPYSFPASEDFPRADQRGAISGRLLVQDSYISEDCISAEGAY
VGLAPPGATGSFQKENKGYQFWTKADNEGVFMINNIRPGDYNLYAWVPGFVGDYKCAEAI
EITAGCEIDVGDLVYNPPRNGPTLWEIGCPDRTAAEFFIPEPDPMYINKLLVNLPAERFR
QYGLWERYAELYPDGDLVYTVGTSDYQKDWFYAHVNRKVGDNSFKATTWQVKFKLDSVDQ
TGNYTLRVALSSATFSILEVRINDPEASPPEFSSGLIGSDNAIARHGIHGLYYLFNIEIQ
SGKLLQGDNNVYLTQSRNTSAFHGLMYDYIRLEGPPTPNPI
NT seq
1926 nt
NT seq
+upstream
nt +downstream
nt
atgtcaactgctgctgtgcaacttattcaacaagatgatcaagtggtggtagataatggt
atatttcagctcaggctgacaaatcctggtggaacaattgttggaattcaatatggtgga
attgacaatttacttgagcttagtaatccaagcttgaatggagggttctgggacttaaac
tggagtgaagctggaagctctggaacaagaggaaaattcgacacgattgaaggaactagt
tttcaagtcatcactttcagtgatgaagtggtagagctttcattcacgcgaaaatgggat
ccctctttgcagggagagcattcaccattaagtatagataagaggttcataattctccaa
ggctcctcgggcttctactcttatgcaatttatgaacacacacaggatatgccagcattc
aacctcaatgaaaccaggatagctttcatgctcaaaattgaaaagttccattacatggcc
atggcagatgacaggcagagattcttgcccctccccgaagatcgcttacccccaagaggc
gaagaattagcctatccagaagcggtcctgcttgttgatcccgttgagccagaattcaaa
ggagaagttgatgacaagtatcaatactcgtgcgagaataaggatgacaaagtgcacggg
tttatatgtttcgaccctccagtggggttctggcaaatcactcccagcaatgagttcagg
actggtggacctattaagcaggatctcacttcccatgtcaatccaacaactcttgcaatg
tttgtgagtactcactatgggggagaggatttggtgatcaaatttgcaccaggcgagccg
tggaagaaagtgttcggtcctgttttcatctatcttaattctgttgtggacagagatgat
gcctattcactctgggatgatgctaaggaacagatgaagaatgaagttcaaagttggcct
tacagtttcccggcttcagaagattttccacgcgctgatcaacgaggcgccataagtggg
agactactagttcaagacagctatatcagtgaagactgtatatcagcagagggtgcttat
gtagggctggctccccctggagccactggatcatttcaaaaggaaaacaagggctatcag
ttctggacaaaagcagacaacgaaggcgttttcatgatcaacaacattcgccccggggac
tataatctttacgcttgggtcccgggctttgttggggactataagtgtgcagaagccatt
gaaatcactgcaggttgtgaaattgatgttggtgatcttgtgtacaaccctccaagaaat
ggcccaacattgtgggaaatcggctgccccgatcgcactgctgcagagttcttcatccct
gaacctgatcccatgtacatcaataagctcttagtgaacctccctgcagaaaggtttaga
caatatggactgtgggagagatatgcagagttgtatccagatggggatttggtgtataca
gttgggactagtgactaccagaaagattggttttatgcccatgtgaataggaaagtaggc
gacaattcatttaaagcaacaacttggcaagtaaaattcaaactagacagtgttgatcag
acaggaaactacaccctaagagttgcactttcttctgccacattctctattttagaggtg
aggattaacgacccagaagcgagtccacctgagttctcgagtgggttaatcgggagcgac
aacgcgatagcaaggcatggcattcatggcctctactatttgttcaacattgagatacaa
agtgggaagttgctacaaggagacaataatgtgtaccttacacaatcaaggaatacaagt
gcctttcatggtcttatgtatgactacattcgtttggagggtcctcctactcccaatcca
atttga
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