KEGG   Ipomoea triloba (trilobed morning glory): 116027346
Entry
116027346         CDS       T07384                                 
Name
(RefSeq) DNA-directed RNA polymerases II, IV and V subunit 8B-like
  KO
K03016  DNA-directed RNA polymerases I, II, and III subunit RPABC3
Organism
itr  Ipomoea triloba (trilobed morning glory)
Pathway
itr03020  RNA polymerase
itr03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:itr00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    116027346
  09124 Replication and repair
   03420 Nucleotide excision repair
    116027346
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:itr03021]
    116027346
   03400 DNA repair and recombination proteins [BR:itr03400]
    116027346
Transcription machinery [BR:itr03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol I, II, III common subunits
     116027346
  RNA polymerase III system
   RNA polymerase III
     116027346
  RNA polymerase I system
   RNA polymerase I
     116027346
DNA repair and recombination proteins [BR:itr03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      116027346
SSDB
Motif
Pfam: RNA_pol_Rpb8
Other DBs
NCBI-GeneID: 116027346
NCBI-ProteinID: XP_031124770
LinkDB
Position
8:2280169..2282263
AA seq 145 aa
MVETLFEDIFTVTNIDPDGKKFDKVNRIEARSEQFEMFMQLDINTEVYPIHREEKFMMVL
ASTLNLDGAPDSGYFLQGNRKSLADKFEYVMQGKLYRISEEGSGRLAKADIYVSFGGLLM
QLRGDPSIAAKFELDQRLFILIRKV
NT seq 438 nt   +upstreamnt  +downstreamnt
atggttgagaccctgtttgaggatatttttacagtaactaacatagacccagatgggaaa
aagttcgataaagtgaatcgcattgaggcgaggagcgagcagtttgaaatgtttatgcaa
ttagatataaacacagaggtatatcctatccaccgagaagagaagtttatgatggttctg
gcctccacattaaacttggatggggcaccagattctggttactttcttcagggaaacagg
aaatcacttgctgacaagtttgagtacgtgatgcaaggaaagctgtacaggatatcggag
gaaggctcgggaaggcttgctaaagcggatatatacgtttcgttcggtggacttctgatg
cagctgaggggagatccatcgatagcagctaaattcgagctcgaccagaggctgttcatt
ctcatcaggaaagtttga

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