Ipomoea triloba (trilobed morning glory): 116027390
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Entry
116027390 CDS
T07384
Name
(RefSeq) U4/U6.U5 tri-snRNP-associated protein 2-like
KO
K12847
U4/U6.U5 tri-snRNP-associated protein 2
Organism
itr
Ipomoea triloba (trilobed morning glory)
Pathway
itr03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
itr00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
116027390
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
itr03041
]
116027390
Spliceosome [BR:
itr03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP specific factors
116027390
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
UCH
zf-UBP
zf-UBP_var
Motif
Other DBs
NCBI-GeneID:
116027390
NCBI-ProteinID:
XP_031124838
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All DBs
Position
8:5968827..5974452
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AA seq
556 aa
AA seq
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MTTKREAENSELDEETDSKKQKIVEQSSPSSPPQLAFDNALLPLASYDDDDEDEDGDKRD
QNVVRGRLGSSENKSDSEEDDSEDEGGKGSGGRKHRVVEVRRDCPYLDTVNRQVLDFDFE
KFCSVSLTNLNVYACLVCGKYYQGRGPKSHAYTHSLEAGHHVYINLRTEKIYCLPDGYEV
IDSSLDDIRYVLNPRFSLKQVEQLDNSTQWSRALDGSDYLPGTVGLNNIKETDFVNVTIQ
SLMRVIPLRNFFLIPENYQHNKSPLVHRFGELTRKIWHARNFKGQVSPHEFLQAVMKSSK
KRFRIGAQSDPVEFMSWLLNTLHADLRTSKKGSSIIYQCFQGELEVVKEMHSRAVTENKE
NGDAQTNGDGGSDTVNVIAETSRMPFLMLGLDLPPPPLFQDILEKNIIPQVPLFNILKKF
DGETVTEVVRPRIARMRYRVTKLPKYLILHMRRFTKNNFFVEKNPTLVNFPVKNLELKDY
IPLPSPKDNEKLRSKYDLIANIVHDGKPGEGSYRVFVQRKSEALWFEMQDLHVTETLSHV
VALSEAYMQIYEQQQQ
NT seq
1671 nt
NT seq
+upstream
nt +downstream
nt
atgactacaaagagggaggcagaaaatagtgagctggatgaggaaacagactcaaagaag
cagaagatagtggagcaatcctccccctcttctccacctcagcttgcttttgataatgcc
cttcttccacttgcatcatatgatgatgatgatgaggatgaagatggtgacaagagagat
caaaatgttgtaagaggaagattggggagcagtgagaacaagtctgacagtgaagaggat
gatagtgaagatgaaggtgggaaaggaagtggaggaaggaagcaccgagtggttgaagtg
agaagggactgtccttatcttgatacagttaatagacaggttctggattttgactttgaa
aaattttgttctgtgtctttaacaaatttaaatgtatatgcatgtttggtgtgtgggaag
tattaccaaggaagggggccaaaatctcatgcatatacacacagtcttgaggcagggcac
catgtttacatcaatctgcgaacagagaagatatactgtcttcctgatggatatgaagtt
atagattcatcactggatgatattcgatatgttctgaatcctagattttctttgaaacaa
gttgaacagcttgataacagcacacagtggtctagggcactcgatggatctgattatctt
cctggaacggtggggctgaataacattaaggagactgattttgttaatgttacaattcag
tctttgatgagggtgattccattgaggaatttctttcttatccctgaaaattatcaacac
aataaatccccactggttcatcgatttggagaactcactcgaaagatttggcatgctagg
aacttcaaaggacaggtcagcccacatgaattcttgcaagctgtcatgaaatcaagcaaa
aaacgtttccgaataggcgcgcagtctgatcctgttgaatttatgtcatggcttcttaat
accctgcacgcagatctcagaacttccaagaaaggtagcagtataatctaccagtgcttc
cagggtgagttggaggtggtgaaagagatgcacagtagagctgttactgagaataaagag
aatggagatgcccagactaatggtgatggtggaagtgacactgtcaatgtaatcgctgaa
acaagtagaatgcctttcttgatgcttggacttgatttacctccacctcctcttttccaa
gatattctggagaagaacattattccccaggttccattattcaatatattgaagaagttt
gatggtgagactgtgactgaagttgtaagacctcgtatagctaggatgagatatcgtgtg
acaaaactgccaaagtatctaattctccacatgcgccgatttacaaagaacaatttcttt
gtggaaaaaaaccctactcttgtcaacttccctgtgaaaaatctagagctgaaggactat
attcctcttccatcacccaaggacaacgaaaaattgcgttccaagtatgacttgattgcc
aacattgttcatgatggcaaacctggtgaaggatcctacagggtgttcgtacagcgaaag
tcagaagcactatggtttgagatgcaagacttgcatgtcacggagactctctcgcatgtc
gttgcgctctcagaggcatatatgcagatctatgagcagcagcagcagtaa
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