Ipomoea triloba (trilobed morning glory): 116027929
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Entry
116027929 CDS
T07384
Name
(RefSeq) KH domain-containing protein HEN4-like
KO
K21444
poly(rC)-binding protein 3/4
Organism
itr
Ipomoea triloba (trilobed morning glory)
Brite
KEGG Orthology (KO) [BR:
itr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
itr03019
]
116027929
Messenger RNA biogenesis [BR:
itr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Other mRNA localization factors
116027929
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
KH_1
KH-I_KHDC4-BBP
KH_2
KH_KhpA-B
Motif
Other DBs
NCBI-GeneID:
116027929
NCBI-ProteinID:
XP_031125572
LinkDB
All DBs
Position
8:4902694..4911303
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AA seq
688 aa
AA seq
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MSVKLTPSKRPYDRSITETNDRGKWQKSAGLGSEKSPLKTSAPSKFLRVLCPVSRIGFII
GEDGNILPEIGQATGAQVRVEEAIPGCDERVVVVLGSGDKDGAGSEQHEAKVEETDTKDT
DNELAENDGNGQSKQSAEVEDSKLRREISAIQEALLCLFERMVKEDLEKDRGDDEGNNSS
FLTLRLLIFSSQVNCLMGKGGSVLKQISSESGAEIHILAREKLPLCASSSDDLVQISGQH
GAVKKAIESISQQLLESSPLEQDPLPANASGPSSQPFGHRFSSQDSQPRPNNPFNGPRPP
YSTGYHDGETGFRGQMNPPQDALTFRLLCPDEKVGGVIGKGGSIIKTIQHETGCEIQVLE
GAADSEDRIIAISGSVHPHDRISPPQDAVLRVQSRIFRALPESKDNTMLAKLLVSSNQIG
CLLGKGGSIIAEMRKSTGAYIRILGKDQTPNCASENEEVVQVNGEFDTVQEALFQITSRL
QEHFFRDAFPSMNRPTNPRFLDHIPLPSYRGRRELSPAGMYPSMGPPFHQFDGIGGLPPR
GGFHPHDDRPPFMPNFHRSGVRPPVSERMPSSGPWVPQGLIDGGGPMGMPDYAAGPQRRI
GGFGGGSPAIITSTKVEVVVPRSVVPEIYGDGGGCLRQICEISDAKVIINDPKPGATEAM
IIISGTPEQTNAAQSLIQAFVMLETEAA
NT seq
2067 nt
NT seq
+upstream
nt +downstream
nt
atgtcagtaaagttaacaccttctaagagaccatatgatcgaagcattacagaaactaat
gacagaggaaagtggcaaaaatcagctggtttaggttcagagaaatcaccattgaagaca
tctgctccaagcaagtttctccgtgtcctctgtcctgtttcaagaattggatttatcatt
ggggaagatggcaacatccttcctgaaataggtcaggcaactggtgcacaggttcgggtt
gaggaagctatccctggatgtgatgagagagtggttgttgttttaggttcgggtgataaa
gatggagcaggatctgagcagcatgaggccaaggttgaggaaactgacacaaaagatacg
gacaatgagttggctgaaaatgatggcaatggccaaagtaaacagtctgctgaggttgaa
gactccaaattgagaagagaaatttcagctattcaggaagctctgttgtgcttatttgaa
agaatggttaaagaagatttggagaaggacaggggagatgatgagggtaataattcttcc
tttttaactttaaggttgctcatattcagcagccaagtgaactgcttgatggggaaaggt
ggtagtgtcttaaagcagatttcgtctgagagcggggctgagatacacattcttgcaagg
gagaaacttcctctttgtgcttcttcatctgatgatcttgttcagatttctgggcaacat
ggtgctgttaagaaagctattgagtctatttctcaacaacttcttgaaagctcccctctg
gagcaagatcctttgccagccaatgcaagtgggccctcttctcaaccgtttggccatcgc
ttttctagccaggattcacaacctcgaccaaataatcctttcaatggaccaagacctcct
tattctactggatatcatgatggtgaaactggatttcgtggccaaatgaatcctcctcag
gatgccttaactttccgattactttgtcctgatgaaaaagtgggaggcgtaattggaaaa
ggagggagtataatcaagacaattcaacatgagactggctgtgagatccaagttctagaa
ggtgcagctgattctgaagatcggattattgccatatctggttcggtgcatccacatgat
aggatatctcctccacaagatgctgtccttcgtgtacagtccagaatttttagggctcta
cctgaaagcaaggacaacacaatgctagcaaaacttcttgtctcctctaatcaaattgga
tgccttttgggcaaaggtggttctattattgctgaaatgaggaaatcaactggtgcttat
attcgtattctggggaaggatcaaacaccaaattgtgcttctgagaatgaggaagtagtt
caggtaaatggtgaatttgatacagttcaagaggctctttttcagataacctcaagattg
caggagcatttctttcgtgatgcgtttccttctatgaatcgaccgacaaatcctcgcttt
ctggaccatattcctcttccttcataccggggaaggagggaactttctcctgctggaatg
tatcctagtatgggtccaccatttcaccagtttgatggcattggaggcctgcctccacgt
ggtggtttccatccacatgatgatcgtcctccttttatgcctaattttcaccggtcaggc
gtccgacctcctgtttctgaacggatgccatcttctggaccttgggttccccagggactg
attgatggtggtggtccaatgggcatgcctgactatgcagcaggtccccagagaagaatt
ggtggatttggagggggaagtccagctattataactagcaccaaggtggaagtagttgtt
cctcgttctgttgttcctgaaatctatggggatggtgggggatgtctcagacaaatatgt
gagatttctgatgcaaaagttatcattaatgatcccaagcctggagcaacagaggctatg
ataattatatctggaacacctgagcaaacaaatgctgcgcagtctcttattcaggcattt
gtgatgcttgagacagaagcagcatga
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