Ipomoea triloba (trilobed morning glory): 116028021
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Entry
116028021 CDS
T07384
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein Prp31 homolog
KO
K12844
U4/U6 small nuclear ribonucleoprotein PRP31
Organism
itr
Ipomoea triloba (trilobed morning glory)
Pathway
itr03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
itr00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
116028021
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
itr03041
]
116028021
Spliceosome [BR:
itr03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
116028021
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nop
Prp31_C
Motif
Other DBs
NCBI-GeneID:
116028021
NCBI-ProteinID:
XP_031125680
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All DBs
Position
8:complement(16632784..16640388)
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AA seq
485 aa
AA seq
DB search
MATLADSFLADLDELSDNEADILDEGNVDAEHMEEDVDGELADIETLNYDDLDSVSKLQR
TQRYINIMQKVEEALEKGSENSETGMVLEDDPEYQLIVDCNALSVDIENEIIIIHNFIRD
KYRLKFPELESLVHHPIDYARVVKKIGNEMDLTLVDLEGLLPSAIIMVVSVTASTTNGKP
LPEDVLQKTIEACDRAFALDSAKKKVLDFVESRMGYIAPNLSAIVGSAVAAKLMGTAGGL
SSLAKMPACNVQLLGAKKKNLAGFSTATSQFRIGFIEQTEIFQSTPPPLRMRACRLLAAK
ATLAARVDSTRGDPTGKTGRSLLEEVRKKIEKWQEPPPAKQPKPLPVPDSEPKKKRGGRR
LRKMKERYAITDMRKLANRMQFGVPEESSLGDGLGEGYGMLGQAGSGKLRVSVGQSKLAA
KVAKKFKEKNYGSSGATSGLTSSLAFTPVQGIELSNPQAYVNQLGSGTQSTYFSETGTFS
KIKRT
NT seq
1458 nt
NT seq
+upstream
nt +downstream
nt
atggcaactcttgctgattctttcttagcagatttggatgaattatctgacaatgaagct
gatattctcgatgagggcaatgtggatgctgagcacatggaggaagatgttgatggtgag
ctagctgatatagaaacacttaactacgatgatctggatagcgtctctaaattgcagagg
acccagcgttatatcaatattatgcagaaagtagaagaagcactagaaaagggttctgaa
aactcagaaacagggatggttctagaagatgatccggagtaccagctgattgtagattgt
aatgcattgtcggttgatattgagaatgaaattattataattcataatttcatacgtgat
aagtaccgcctaaaattcccagagttggagtctcttgttcaccacccaattgactatgcc
cgagtggttaagaaaattgggaatgagatggacctcacccttgttgatctggaaggactg
ttgccttcagctattattatggttgtttcagttacagcatcaactacaaatggcaagcca
ctgcctgaagatgtcttgcaaaaaacaattgaagcttgtgatcgtgcatttgctcttgat
tcagcgaagaagaaagtccttgattttgttgagagtcgaatggggtatattgctccaaac
ctctccgctattgtaggaagtgctgttgctgcaaaacttatggggactgctggtggtctt
tcctcgttggcaaagatgcctgcttgtaatgtgcaacttcttggtgctaaaaagaagaac
cttgctgggttctccacagcgacatcccaattccgcattggatttattgagcagacagaa
atatttcagagcacaccccctcctctaaggatgcgtgcctgtcgactgttagctgcgaaa
gctacccttgctgcacgtgttgattcaacaaggggagacccaacggggaaaactgggcga
tctctcctagaagaggttcgtaagaagatagagaagtggcaagagccacctcctgctaaa
cagcctaaaccacttcctgttccagattctgagcctaagaaaaagaggggtggacgtaga
ctgaggaagatgaaagaaaggtatgccattacagacatgcggaagctggctaacagaatg
cagtttggagtacctgaagagagctcattgggggatggtttgggtgagggatatggaatg
cttggtcaagctggaagtggcaaattacgcgtgtcagttggccagagcaagcttgctgcc
aaagtagctaagaaatttaaggagaagaattatggaagcagtggtgctacatcgggactg
acttcaagtttagccttcactcctgtgcaggggattgaactgtcgaacccacaagcatat
gtaaatcaacttgggtcaggaacccagagcacgtacttttcagaaaccgggacattttcc
aagatcaagagaacataa
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integrated database retrieval system
