KEGG   Ipomoea triloba (trilobed morning glory): 116028049
Entry
116028049         CDS       T07384                                 
Name
(RefSeq) probable E3 ubiquitin-protein ligase RHA1A
  KO
K16281  RING-H2 zinc finger protein RHA1
Organism
itr  Ipomoea triloba (trilobed morning glory)
Brite
KEGG Orthology (KO) [BR:itr00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:itr04121]
    116028049
Ubiquitin system [BR:itr04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    116028049
SSDB
Motif
Pfam: zf-RING_2 zf-C3HC4 zf-RING_11 zf-C3HC4_2 zf-rbx1 zf-RING_5 zf-RING_16 zf-RING_UBOX zf-ANAPC11 zf-RING_4 Rtf2 Prok-RING_1 zf-C3HC4_3 zf-RING_Vps41 RINGv zf_RING_Vps8_fungal zf-RING-like RH_dom Prok-RING_4 zf-RING_6 zf-Nse Rad50_zn_hook zf-C3HC4_4 zf-C3H2C3 zf-C3HC4_5 PHD_NSD
Other DBs
NCBI-GeneID: 116028049
NCBI-ProteinID: XP_031125702
LinkDB
Position
8:8304011..8304654
AA seq 159 aa
MGFPVGYTDLFLPELLVQVLMVMDLVRNLIAMFFGILGLDNFLEPEMSSTPEESKSELQS
LSAALIREVLPVVKFSEVAERAESCAVCLLEFDGNDEIRRLRNCRHIFHRSCLDRWMDHD
QKTCPLCRTPFIPRDMQERFNERLWLAYGGENSQIVAGV
NT seq 480 nt   +upstreamnt  +downstreamnt
atgggttttccggttgggtatacggatctttttctgccggagctgctggtgcaggtgctc
atggttatggatttggtgagaaatttgattgccatgtttttcggcattctgggtctggac
aatttcttggaaccggaaatgtcgtcgacaccggaggaatccaagtcggagctccaatca
ttatccgccgcccttatccgggaggtcttgccggtggtgaagttctcggaggtggcggag
cgggcggagagctgcgcggtgtgcttgttggagttcgacggcaacgatgagatccgacgg
ctgaggaattgccggcacatattccaccggagctgcctggaccgctggatggaccacgat
cagaagacgtgcccgctgtgccggacgccgttcataccgagggatatgcaggagcggttc
aacgagagactgtggttggcttacggcggcgagaactcgcagattgttgccggtgtttag

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