Ipomoea triloba (trilobed morning glory): 116028300
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Entry
116028300 CDS
T07384
Name
(RefSeq) nuclear poly(A) polymerase 4-like isoform X1
KO
K14376
poly(A) polymerase [EC:
2.7.7.19
]
Organism
itr
Ipomoea triloba (trilobed morning glory)
Pathway
itr03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
itr00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
116028300
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
itr03019
]
116028300
Enzymes [BR:
itr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
116028300
Messenger RNA biogenesis [BR:
itr03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Poly(A) addition factors
116028300
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAP_NTPase
PAP_central
PAP_RNA-bind
NTP_transf_2
MTPAP-like_central
Nrap_D2
Motif
Other DBs
NCBI-GeneID:
116028300
NCBI-ProteinID:
XP_031125822
LinkDB
All DBs
Position
1:complement(9398792..9406440)
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AA seq
770 aa
AA seq
DB search
MVGSENSAETLPPSMEVAPRNYGVTRPLSLAGPSEADIHRNAALEKFLRDSGLYESEEET
ARREEVLRKLDQIVKLWVKQLTCQRGYTEQMVEDANAVIFTFGSYRLGVHGPGADIDTLC
VGPSYVHRDEDFFITLHGILAEKEEVTELQPVPEAHVPVMKFKFQGISIDLLYASISLLV
VPENLDISDRSVLYNIDEQTVRSLNGCRVADQILKLVPNAEHFRMTLRCLKFWAKRRGVY
SNVTGFLGGVNWALLVARVCQFYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGF
LVWDPRKNPKDRTHHMPIITPAYPCMNSSYNVSPSTLRVMMDQFQFGNKICEEIELNNKH
WDALFEPYIFFEAYKNYLQVDIVAAHTNDLLAWKGWVESRLRQLTLKIERDTKGMLQCHP
YPTEFVDASKPCPHCAFFMGLQRKQGVQVQEGQQFDIRGTVDEFKQDVSMYSYWGPGMDI
FVSHVRRKHIPAYVFPEGYKRQRQSRNTTYRSSCTPEKDVKGCTSPEERNPKRKPETEKT
DVKSEKPGKRASISPQYLGSVSPACVELPQMMGICEDSTLEHRNASDEVRGRVNISVDGL
SGCQNGITLNENARSLPVNLSECVIPSALFGIPKERISIQEVLTSCEVLQNDEKAEALES
AQLGGAGAAIGNNEQLNGPCNQGGQFECVETILVSSNKIQNLSCRGDISLAEQISQIGDQ
CLSASGVLGNGLAEKTKPNHDIARIVETKDVASAEAVQEPAIRLSLESTA
NT seq
2313 nt
NT seq
+upstream
nt +downstream
nt
atggtgggctcggagaactcagctgagactttgccgccatcaatggaagtggcaccgagg
aattacggtgtaactagaccgttgtctcttgcggggccgtctgaggccgatatacataga
aacgcagctcttgaaaagtttctgagagattctgggctgtatgagagcgaggaagagact
gcaaggagagaagaggtgttgcggaagcttgatcagattgtgaagctttgggtgaagcaa
ttgacctgccagagaggttatacagaacaaatggtggaagatgcaaatgctgtcatattc
acttttgggtcttataggcttggtgttcatgggcctggagctgacattgacacattatgt
gttggtccatcttatgtccatcgagatgaagatttttttattactctacatggcatatta
gcagagaaggaagaagttactgaacttcaacctgttcctgaggcacatgtacctgtcatg
aaattcaaatttcaaggaatatcaattgatctcctttatgctagtatctctctcctggtt
gtccctgaaaatttggacatttcagaccgttctgttctctacaatattgatgagcaaact
gttcgaagtctcaatgggtgcagggttgctgatcaaattcttaaacttgttcctaacgct
gagcatttccggatgacactaagatgcttgaaattttgggccaaaaggcgcggcgtatat
tcaaatgttactggatttcttggtggtgtaaattgggctcttttggttgctcgggtttgc
cagttttatcctaatgcaattcctagtatgttggtttcacggttcttcagagtctataca
caatggcgttggccaaatcctgttatgttatgtcctatagaagaagatgagcttgggttt
cttgtttgggatcctcgcaagaatcccaaagaccggactcatcatatgccaatcatcact
cctgcttacccttgcatgaattctagttacaatgtctcaccaagcactcttcgtgtaatg
atggaccaatttcaatttggtaacaaaatttgtgaggagattgagttgaataataaacat
tgggatgccctttttgagccttatattttctttgaggcatacaaaaactatcttcaggtt
gacattgttgcagcacacactaatgatctgttggcttggaaaggatgggtggagtcgcgg
cttagacaactaacacttaagatagagcgtgacacaaagggaatgttacagtgccatcca
tatccaactgaatttgtagatgcttctaaaccatgcccacattgtgcttttttcatgggc
ttgcaaaggaaacaaggagttcaggtgcaagaagggcaacagtttgatattcgtggaact
gttgatgagtttaaacaagatgtaagcatgtactcttattggggtcctgggatggatata
tttgtatctcatgttcgtagaaaacatattcctgcttatgtctttcctgaaggatacaag
agacagcgtcagtctagaaacacaacttatcgtagttcttgtactcctgaaaaagatgtc
aaaggctgcacatcccctgaagaaaggaatccaaagagaaaacctgaaactgaaaaaact
gatgtgaaatcagagaaacctgggaagcgggcatctataagtccacaatatctaggatct
gtctctcctgcatgtgttgaattacctcagatgatgggcatctgcgaagactctactcta
gagcataggaatgccagtgatgaggtcagaggtagagtaaacatctcagtggatggtcta
tctggatgtcagaatggcattactttgaatgaaaatgcccggtccctacctgttaattta
agtgaatgtgttattcctagtgctttatttggaattccaaaagaaagaatttctattcag
gaggtgctcacttcatgtgaggtcctacagaatgatgaaaaggcggaagcactggaatca
gctcagttgggtggcgctggagctgcaattggcaacaatgagcagctaaatggaccatgc
aatcaaggtggacagtttgaatgtgttgaaactatacttgtatcaagtaacaaaatccag
aacctcagttgccggggtgatataagcttggcagagcagatttctcaaattggggatcaa
tgtctaagtgctagtggagtattggggaatggcttggctgaaaaaacaaagccaaatcat
gacattgcaaggatagttgaaactaaggatgtggcaagtgcagaagccgtacaggagcca
gcaataaggcttagtctggaatcaacagcatga
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