Ipomoea triloba (trilobed morning glory): 116028359
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Entry
116028359 CDS
T07384
Name
(RefSeq) E3 ubiquitin-protein ligase BRE1-like
KO
K22651
E3 ubiquitin-protein ligase RNF4 [EC:
2.3.2.27
]
Organism
itr
Ipomoea triloba (trilobed morning glory)
Brite
KEGG Orthology (KO) [BR:
itr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
itr04121
]
116028359
Enzymes [BR:
itr01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
116028359
Ubiquitin system [BR:
itr04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
116028359
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C3HC4_2
zf-RING_2
zf-C3HC4
zf-C3HC4_3
zf-RING_UBOX
zf-RING_5
zf-C3HC4_4
zf-rbx1
zf-ANAPC11
zf-RING_4
Prok-RING_4
zf-RING_10
Sina_RING
zf-Nse
Zn_ribbon_19
zf_C2H2_ZNF598
TRAF3_RING
zf-RING_6
RING_XB3-XBAT31
zf-RING_11
Motif
Other DBs
NCBI-GeneID:
116028359
NCBI-ProteinID:
XP_031125916
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All DBs
Position
1:complement(32786445..32791551)
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AA seq
261 aa
AA seq
DB search
MLSTKKCEVFRHLLLPPPGKKLPFLPSSCSTLLIKYKLNISVLSLSPSLKLKSLCHSENP
SNPVSKMVLDIDLNGPPRVEDLLVIDDAIGVNTHLELGLPQLQVTANSDSIDDEVVICSP
RSFAEAREKSRRNHQVIEVLDDETEAQGAPPEGFIFCRRRKVSRRNGANVSCINLETPEK
YKERKGDKPEQVSQFAAQPKPPTFSCPVCMGQFVEETSTKCGHIFCKKCISTAIASQGKC
PTCRQILKGKDTFRVYLPILD
NT seq
786 nt
NT seq
+upstream
nt +downstream
nt
atgttaagtaccaaaaaatgcgaagttttccgtcatcttcttctcccccctcccggaaag
aaattgccctttttgccatcatcatgctcaaccttacttataaagtacaaactgaacatc
tccgtcctctctctatcgccatcgctaaaacttaaaagcctctgccactcagaaaatccc
agcaacccagtttcaaaaatggttctagatatagaccttaatggtccacctagagttgag
gatcttttagtaatagatgatgctattggtgtgaatacacatttagagcttggactgcct
caattacaagtgacagcgaattctgattctatagatgatgaagttgtgatatgctcccca
agaagttttgctgaggctagggaaaagtcaaggaggaaccatcaggtaatagaagtgcta
gatgatgaaactgaagcacaaggagcccccccagaagggtttatcttttgcagacgaagg
aaagtttcaagaaggaatggtgcaaatgtttcgtgtataaacttggaaactccagaaaag
tacaaggagagaaagggtgataagcctgaacaggtgtcccagtttgcagctcaaccaaaa
ccacccacctttagctgtccagtttgtatgggacagtttgtggaggagacgtcaaccaag
tgcgggcacatattctgtaaaaaatgcatctcgactgcaatagcatcccaagggaaatgc
cccacctgtcgacagatactcaaaggaaaagacacattcagggtctaccttccgatatta
gattaa
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integrated database retrieval system
