KEGG   Ipomoea triloba (trilobed morning glory): 116028620
Entry
116028620         CDS       T07384                                 
Name
(RefSeq) chromatin structure-remodeling complex protein BSH
  KO
K11648  SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1
Organism
itr  Ipomoea triloba (trilobed morning glory)
Pathway
itr03082  ATP-dependent chromatin remodeling
itr03250  Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:itr00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    116028620
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    116028620
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:itr01009]
    116028620
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:itr03021]
    116028620
   03036 Chromosome and associated proteins [BR:itr03036]
    116028620
Protein phosphatases and associated proteins [BR:itr01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     116028620
Transcription machinery [BR:itr03021]
 Eukaryotic type
  RNA polymerase II system
   Coactivators
    BAF/PBAF complex
     116028620
    SWI/SNF complex
     116028620
Chromosome and associated proteins [BR:itr03036]
 Eukaryotic type
  Chromatin remodeling factors
   BAF complex
    116028620
   PBAF complex
    116028620
   SWI/SNF complex
    116028620
SSDB
Motif
Pfam: SNF5
Other DBs
NCBI-GeneID: 116028620
NCBI-ProteinID: XP_031126247
LinkDB
Position
9:complement(7139603..7144197)
AA seq 241 aa
MKQLSAWSFTKAPVKFKIPTNDNLVPIRLDIEIDGQRLRDAFTWNPSDPDTEVVLFAKRT
VKDLKLPPAFVTQIAQSIQSQLAEFRSYEGQEMFTGEKVVPIKLDLRVNHTLIKDQFLWD
LNNFESDPEEFARNFCKDVGIEDPEVGPAIAIAIREQLYEIAIQSVASARESRMHKKGRR
GFEHFSASKAGGAGVDLVKLYGNKTSVVRKRREWDVYEPIVDLLSNEEVDALEAREERSA
R
NT seq 726 nt   +upstreamnt  +downstreamnt
atgaaacagctctctgcttggagctttacgaaggcccccgtcaagttcaagattccgact
aatgacaatctagttccaatccgtctagacattgaaatcgatggccagcgacttagagac
gcatttacttggaatccatctgatcctgatacagaggtggtgctatttgcaaaaagaact
gtaaaagacctgaaacttcccccagcttttgtcacacagattgctcagtccattcaatca
caacttgcagagtttcgatcatatgagggacaagaaatgttcactggagaaaaagttgtt
cctataaagcttgatcttcgagttaaccatactctgataaaggaccagtttttgtgggac
ttgaataatttcgagagtgaccctgaagaatttgcaaggaatttttgcaaagatgtggga
attgaagacccagaagttggacctgcaattgccattgcaatcagagaacaactttatgaa
attgctattcagagtgttgcatcagcaagggaaagcagaatgcataagaaggggcgcaga
ggatttgaacatttttctgccagtaaggctggtggagctggagtggacttggttaagtta
tatggcaataaaaccagcgttgtccggaaaaggagggaatgggatgtatatgaacctatt
gttgatctcttgtcaaatgaggaagtggatgctctcgaggcaagagaagaaaggagtgct
cgataa

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