Ipomoea triloba (trilobed morning glory): 116028910
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Entry
116028910 CDS
T07384
Name
(RefSeq) E3 ubiquitin-protein ligase RNF170-like
KO
K15707
E3 ubiquitin-protein ligase RNF170 [EC:
2.3.2.27
]
Organism
itr
Ipomoea triloba (trilobed morning glory)
Brite
KEGG Orthology (KO) [BR:
itr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
itr04121
]
116028910
Enzymes [BR:
itr01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
116028910
Ubiquitin system [BR:
itr04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
116028910
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_UBOX
zf-C3HC4
zf-C3HC4_3
zf-C3HC4_2
RING_XB3-XBAT31
zf-C3HC4_4
zf-RING_2
Motif
Other DBs
NCBI-GeneID:
116028910
NCBI-ProteinID:
XP_031126624
LinkDB
All DBs
Position
9:complement(2464609..2467145)
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AA seq
313 aa
AA seq
DB search
MKRFFFNLPSSHRHHHLHQNPNRDNSSVAASTSTSEATNPSYSSELRESASGRTEKEVSI
YESANGGEVEEEGWEEISPFRGESAEWITASASGQRNADGEDSASLSMSAVSRENKEAGT
AMSARMDSPPSGDCCPICFSNFVVPCRGPCGHWYCGGCILQYWNCSAALQPCNCLMCSKQ
ITKLTPEASLYHSQEVEVTKVLGSIRIYNRLFVGDTYGFMLKVLYLPLYAKRLFREMMNP
DIPGVHLHKLRICAMFLGLLYTLCPFDCLRIGRQNVIDVFDYSAITFSFVLYLVGLYHRR
LLFQNVREMAAID
NT seq
942 nt
NT seq
+upstream
nt +downstream
nt
atgaagaggttcttcttcaatcttccaagctctcaccgacaccatcaccttcatcagaac
cctaatcgtgacaattcctccgtcgctgcgagcactagtactagcgaagccacgaatcct
tcgtattcatcggagctccgcgaatccgcatcggggaggactgagaaggaagtgagcatt
tacgaatcagcgaatggtggagaggtggaggaggagggatgggaagaaatatcgccgttt
cgcggcgagtcagcggaatggataacggcgtcggcttctggtcagagaaatgcggatggt
gaggattcagcctccttgtcgatgagcgcggtttctagggagaacaaggaggcaggaact
gcgatgagtgcgaggatggatagccctcctagtggcgattgctgccctatatgcttcagc
aatttcgtcgtcccctgccgcggcccctgcggtcattggtattgcggaggctgcattttg
cagtactggaactgtagtgcagcccttcagccttgcaactgtctaatgtgttcgaaacag
ataactaagttgacacctgaggcatcgttgtatcactctcaggaagttgaagttacgaag
gttctggggagtattcgaatatataatcgcctttttgttggggacacatatggcttcatg
ctaaaagtgctttatttgccattatacgccaagagattatttcgtgaaatgatgaatcct
gatatacctggtgttcatctacacaaattgcgaatttgtgcaatgttcctgggtctcctt
tatacgctttgccccttcgattgtcttcgaataggccgtcaaaatgtcatagatgtgttt
gattactccgccattacattttcattcgtcttgtatctggttggactctaccaccgaaga
ttgcttttccagaatgtcagggaaatggcagccattgattga
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