Ipomoea triloba (trilobed morning glory): 116028963
Help
Entry
116028963 CDS
T07384
Name
(RefSeq) protein BREAST CANCER SUSCEPTIBILITY 2 homolog B-like
KO
K08775
breast cancer 2 susceptibility protein
Organism
itr
Ipomoea triloba (trilobed morning glory)
Pathway
itr03440
Homologous recombination
itr03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
itr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
116028963
03460 Fanconi anemia pathway
116028963
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
itr04121
]
116028963
03036 Chromosome and associated proteins [BR:
itr03036
]
116028963
03400 DNA repair and recombination proteins [BR:
itr03400
]
116028963
Ubiquitin system [BR:
itr04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
BRCC complex
116028963
Chromosome and associated proteins [BR:
itr03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Other centrosome duplication proteins
116028963
DNA repair and recombination proteins [BR:
itr03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA complex
116028963
FA (Fanconi anemia) pathway
Downstream FA components
116028963
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRCA-2_OB1
BRCA2
BRCA-2_helical
BRCA-2_OB3
Tower
Motif
Other DBs
NCBI-GeneID:
116028963
NCBI-ProteinID:
XP_031126679
LinkDB
All DBs
Position
9:complement(25508532..25515318)
Genome browser
AA seq
1108 aa
AA seq
DB search
MPTWQIHSDAGNTFRWQMSDQQPSSSGVLAPMPPLDSHCLPSMADLLRRQGCAKLMENSN
GNSASEKVSIFLDGSEKPMAVKQSSIAKALSILRDEEGENGREESGTGFQNLMLPTCSDN
AINQSKPAFQNSSGKAANMSNSMFQTGSGKSVTISPAGLVRARKLLNLEETETFQDLEQA
NKLSASADDPFGWQNSFPLRRTEESNSGGVNPNVFHFSPKPHAIKFQTAGGRSISVSSDA
LQRAKSLLGDTEHSNFLDEKDAASPLFSFSDNRKSNSNLSINKSKPCTPSYQCSANGKSS
SSRFTSPLKSTLQKRPLSASLENMHPANNLIKHFDAVADDSAIQSYNGIPRHRHHLQQKS
NMLPISFTEKDIASSPTPLERSSIRVLTDISNTIAFGHTDGKQNFGGARRLGRMNSVSPF
KRPRVAKFTPPLNKNMSVIPNGMSNLAPKESSFKQRVSDRYPFEVVRLYMKEYVGEPPCL
QTKLVNVGDQVRTMNPATAETYVFHDESGRGVLGIEAFYRMLSHFGASEQYFSKVWAANH
YKWIVWKLGCYERCFPAKFSGKLLTFSNVLEELKYRYEREVNYGHRSAIKRILEGDAPPS
SMMVLCISSIDPVCDSKVRPQDHPILPVGVERTSKIELTDGWYSITALLDGILSKMLAAK
KLFLGQKLRIWGASLCGWVGPVSPLEVSKETSLVLHINGTYRAHWADRLGFCKGRGVPLA
FNSIKDSGGAVPITLVGISRIYPVLYRERLSNGGFIVRNERMEAKAINQYNQRRSIVAEG
IASEIQNTNIDILIGNDYESEEGAKLLKILETAAEPDILMAEMTFEQLNSFSSYKAKLEA
KKQSHTQKSLDRALEAAGLKTRDVTPFMRVRVVGLTSKSTRQGHSTRDGLITIWNPTEEQ
KVELTEGQAYAVSGLVALSSDSNTLHLQTRGSTTKWQPLSSSGIQHFWPFFSPRRPNSLS
SLGEVPLSSEFDIVALVIYVGELHTVARQKKQWVFVTDGTQTALDNSLLAISFSSVNTEN
ESFAPEHSYPEGTVVSFCNLIKRDRDRTNHLWVAEGTETSTYHLSYDHPHCSHLKRSVSF
LKNWVKTSGSRIEQLKGKVISIISNSVA
NT seq
3327 nt
NT seq
+upstream
nt +downstream
nt
atgccgacgtggcagattcattccgatgccggaaacactttccgatggcaaatgtctgat
caacaaccgtcttcaagcggcgtccttgctccaatgccccctctggactctcattgcctt
ccctccatggcggatctcttgcgtcgtcaaggatgtgcaaagttaatggagaattctaat
gggaattcggcctcggagaaggtttctattttcctagacgggtcggagaaacccatggca
gtaaagcaatcctccatagccaaggcgctatccattcttcgggatgaagaaggtgaaaat
ggtagagaggagagtggaactgggtttcagaatcttatgttacccacttgttcagataat
gcaattaatcaatcaaaacctgctttccagaatagctcagggaaagcagcaaatatgtca
aattcaatgtttcagacggggtctggtaaatcagtcactatatcaccagcaggtcttgta
agagccagaaagttattgaacttggaagaaactgagacttttcaagaccttgagcaggca
aacaaattgtcagcttctgctgatgatccttttggctggcaaaattcatttcctttacga
aggactgaggaatccaactcaggtggggttaatcccaacgttttccacttctctcctaaa
ccgcatgcaatcaagtttcaaacagctggtgggagatccatttcagtttctagtgatgca
ttgcaacgtgcaaagagcctgcttggagatacagagcatagtaatttcctagatgagaag
gatgcagcttctccattgttttcattttctgacaacaggaagtccaactctaacctttca
ataaacaaaagtaaaccatgtactccatcatatcaatgttcagcaaatggtaaaagttct
tccagcaggtttacatctccactgaagtcgactctacaaaaaagaccattatctgctagt
ttagagaatatgcatccagcaaacaacttgatcaagcattttgatgcagttgcggatgac
agtgcaattcagtcttacaatggcattcctcgtcatcgacaccatttacagcaaaagtcc
aatatgctaccaatcagttttactgaaaaagatattgcttcaagtcctacaccgcttgaa
agatcatcaattagggtgctaactgatatctcaaacactattgcctttggacatactgat
ggcaagcaaaattttggtggggcgaggagacttgggaggatgaattctgtttctcctttc
aagaggccccgagtagcaaaatttactccccctctgaacaagaacatgtcagtcattcct
aatggaatgtcgaatttagcgccaaaagaatcctcctttaaacaaagggtttcagatcgg
tacccctttgaggttgtgcgattgtatatgaaggaatacgttggagagcccccatgctta
caaaccaagctagtgaatgtgggagatcaggtgaggacaatgaatccggcaactgctgaa
acatacgtgtttcatgatgaatctggccggggagttcttggaatagaggctttttaccga
atgctttctcattttggggcttcagagcaatacttttctaaagtgtgggctgcaaatcac
tataagtggattgtttggaaacttggatgttatgaaagatgctttcctgctaaattttct
gggaaactgctgacattctccaatgtgctggaagagttaaaatatagatatgagagagaa
gtaaattatggtcatcgatctgcaattaaaagaattctagaaggtgatgcaccaccttct
tcaatgatggtgttgtgcatttcttccattgatccagtctgtgactccaaagttagacct
caagatcatcctatattgccagttggggtagaaagaacttcaaaaatagagctaactgat
gggtggtattcaattactgctcttttagatggaatactgtccaagatgttagctgccaaa
aaactgtttttgggccaaaaactcaggatctggggagctagcctatgtggctgggtgggg
cccgtttcaccacttgaggtctcaaaggaaactagtttagtactgcatataaatggtaca
tacagagcacattgggctgaccgcttaggattttgtaagggtagaggtgttccactagca
tttaattctatcaaggattctggaggtgcagtccctattacattggttggaatttctagg
atataccctgttctatacagagaaagattaagtaatggaggattcattgtgaggaatgaa
aggatggaagctaaagcaataaatcaatataaccaaagaaggtccattgttgcggaggga
atagcctctgaaattcaaaacacaaacatagatatccttattggcaatgattatgaaagt
gaagaaggggcaaaactcttaaagatacttgagacggcagctgaaccagacattcttatg
gcagaaatgacttttgaacaactaaactcattttcttcttataaagctaaattagaggcc
aagaagcagtctcatacacaaaaatctcttgacagagctctagaagctgcaggtcttaaa
acaagggatgttactccatttatgcgagttagagttgttggattaaccagtaaaagtact
cgacaagggcattccacacgagatggcttaattactatctggaatccaactgaagaacag
aaagtggagcttactgagggtcaggcttatgctgtttcagggcttgtggccctaagctct
gattcaaacacccttcacttgcaaacaagaggatcaacaaccaaatggcaacccttatct
tcctctggaattcaacatttttggccatttttcagtcctcgaagaccaaattcattgtct
agtttgggtgaagttcctctctcgagtgagtttgatattgttgcactggtcatttatgtg
ggagagctgcatacagttgctcgccaaaagaagcagtgggtgttcgtaacagatggaacg
caaacagcattggataattcattgttggctatcagcttcagttcagtgaatactgaaaat
gaatcatttgcaccagaacatagttatcctgaaggaacagtggtaagtttctgtaatctt
atcaagagagatagagatagaacaaaccatctctgggtggctgaagggacagagacttca
acctatcacttaagttatgatcatccacactgttctcatttaaaaagatccgtttctttt
ctcaaaaattgggtgaagacttctggctcgagaattgaacagctgaaggggaaagttata
tccattatcagcaactcggtagcatag
DBGET
integrated database retrieval system
