Ipomoea triloba (trilobed morning glory): 116029078
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Entry
116029078 CDS
T07384
Name
(RefSeq) RAB6A-GEF complex partner protein 1-like isoform X1
KO
K20476
RAB6A-GEF complex partner protein 1
Organism
itr
Ipomoea triloba (trilobed morning glory)
Brite
KEGG Orthology (KO) [BR:
itr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
itr04131
]
116029078
Membrane trafficking [BR:
itr04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Rab associated proteins
116029078
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RIC1
WD40_CDC20-Fz
Beta-prop_EML_2
Beta-prop_VPS8
Motif
Other DBs
NCBI-GeneID:
116029078
NCBI-ProteinID:
XP_031126819
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All DBs
Position
9:complement(18950541..18963274)
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AA seq
1124 aa
AA seq
DB search
MYMAYGWPQVIPLEPGLCTSSQQIVYLKVTNRLLLVVSPTHLELWSSSQHRVRLGKYKRD
SDSIHKEGENIRAVWSPDTKLIAVLTSSLHIQIFKVQLTEKKIQIGGKQPSGFFLANISL
LLNEQVPFANKNLTVSNIVCDNKHMLVGLSDGSLYNISWKGEFYGAFNIDAQLCDGSEAN
KLSTSLENGLAPSRAVNDSIPSHCKSKASAVSHLEFSLPLRSLFVLYSDGQLVLCSVSKK
GFRQAEPVKAEKRLGSGDAVCASVASEQQILAVGYKRGVVELYDLAESASLIRSVSLYDW
GYSVEDTGAVNCIAWTADNSAFAVGWKLRGLTVWSVSGCRLMCTIRQIGLNSLSSPVIKP
SQECKYEPMMGGTSLMHWDEYGYRLYAVEEGSSERIIAFSFGKCCLNRGVSGTTYVRQVI
YGEDRLLVVQSEDTDELKILHLNLPVSYISQNWPILHVAASKDGMYLAIAGLHGLILYDI
RLKKWRFFGDISQEQKIQCKGLLWMGKIVVVCNYDDSSNEYELLFYPRYHLDQSSLLCRK
SLLAKPMVMDVYQDYLLVTYRPFDVHIYHVKLLGELTPLSTPDLQLSTVRELSIMTAKCH
PAAMHFIPDQLPRKTLTENGISSSDIVVREPARCLILRTNGELSLLDLDEGRERELTDSV
ELFWVTCGQSEEKTTLIEEVSWLDYGHRGMQVWYPSPGVNTFKQEDFLQLDPELEFDREV
YPLGLLPNAGVVVGVSQRMSFSASTEFPCFEPSPQAQTILHCLLRHLLQRGKEQEALRLA
QLSAEKPHFSHYLEWLLFTVFEAEISGQNTRNNQTTMSNHATVTSLLEKTCDLIRNFPEY
CDVVVSVARKTDGRHWADLFAAAGRSTELFEECFQRRWYRTAACYILVIAKLEGPAVSQY
CALRLLQATLDESLYELAGELVRFLLRSGREFEPAPVDSEKLSPRFFGYFLFPSSYQRQS
FDSKGSSFKEQNAHVASVKNILESHASFLMSGKELSKLVAFVKGTQFDLMDYLRRERYGS
ARLENFALGLELIGQKLQMGTLQSRLDAEFLLSQMCSVKFKEWIVVLATLLRRSEVLFDL
FHHDLRLWEAYSITLQSHPAFTEYHDLLATLEEMLSSTSNSEDK
NT seq
3375 nt
NT seq
+upstream
nt +downstream
nt
atgtatatggcatatgggtggccacaggtcatccctctggagcctggtctctgcacttct
tctcagcaaattgtgtatctcaaggtcaccaatcgcttattgcttgtggtttcaccaact
catcttgagctttggtcttcttctcagcatagggtgagattggggaagtacaagagagat
tcagattcaattcataaggaaggcgaaaatattcgggctgtttggagtcctgatacgaaa
ttgattgctgttcttacctcttctttgcatatccaaatatttaaggttcaacttacagaa
aagaaaatacaaattggagggaaacaaccatctggtttttttctagcaaatattagtttg
ctcctaaacgagcaggtgccatttgctaacaagaatttgacagtgagcaatattgtctgt
gataacaaacatatgcttgttggactctctgatgggtcattgtataacatatcctggaag
ggtgagttttatggagcctttaatattgatgctcagctttgtgatggtagtgaggctaat
aaactttcaacttctctggaaaatggtcttgctcctagtagagccgtaaatgattctata
ccaagtcattgcaagtcaaaagcatctgctgtgtcccacctggaattttccctacccttg
aggtcgctatttgtgctatactctgatgggcaacttgtcttatgttctgtaagcaagaag
ggcttcaggcaagctgagcctgtcaaggctgaaaagagattgggatctggtgatgctgtt
tgtgcctctgttgcttcagaacaacaaattcttgctgttggttacaaaagaggtgttgtc
gagttgtatgatcttgcagaatcggcttcacttatacgttctgtttctttgtatgactgg
ggatattctgtggaagatactggtgctgtgaattgtattgcctggacagctgacaattct
gctttcgcagttgggtggaagttaagaggtcttacagtttggtctgtttctggttgtcga
ttgatgtgtacaatccgccaaattggattaaattctctatcttctccagtaattaagcct
agccaggaatgtaaatatgaacctatgatgggtggcacctcactgatgcactgggatgaa
tatggatataggctttatgctgttgaggaaggatcttcagagagaattattgcattctcc
tttgggaaatgctgtctcaacagaggagtttctggaacaacatatgtccgacaagtaatc
tatggtgaagatagattgcttgttgtccagtcagaagatactgatgaacttaaaatcttg
catctcaaccttccagtttcatatatctcccaaaattggcccattctgcacgtggctgct
agcaaagatgggatgtacttggccattgctggccttcatgggttgatattatatgatata
cgacttaaaaagtggcgtttttttggagatattagtcaggagcaaaaaattcaatgcaaa
ggcttgctatggatggggaaaattgttgttgtttgcaactatgatgattcttccaatgag
tatgagttacttttttacccaaggtaccaccttgaccagagttccctactttgtcggaaa
tctttgcttgcaaaaccaatggtcatggatgtttatcaagattatttactagtcacttac
cgcccttttgatgtccatatttatcatgtgaaactgcttggtgaattgacccccctgagt
actccagatttacagctttctacagtccgagagctttcaatcatgactgcgaagtgccat
cctgcagcaatgcattttatccctgatcagcttcctaggaaaactttaacagagaatggt
atatcttcatctgacattgtagtcagagagcctgctagatgtttgatcttgaggacaaat
ggagagctttcacttctcgatttggatgaggggagggaaagagagctcactgactctgtg
gaattgttttgggttacatgcggtcaatcagaggagaaaacaaccctgattgaggaagtt
tcatggttggactatggccaccgaggaatgcaggtttggtatccatctccaggagtcaac
acttttaagcaagaggatttcttgcagttggacccggaattggagtttgatcgtgaggtt
tatcctcttggtttactaccgaacgctggagttgtggtgggcgtttctcagagaatgtca
ttttctgcaagcactgaatttccatgttttgagccatctccccaagctcagaccatattg
cattgcctacttaggcatcttctgcagagaggcaaagaacaagaagcattacgattggca
caactatcagcagaaaagccgcatttttcccattaccttgagtggcttctttttacagtt
tttgaggctgaaatttctggccaaaacacgaggaacaatcagactacaatgtctaatcat
gctactgtcacttcacttcttgagaagacctgcgatctaatcagaaattttccagagtat
tgtgatgtggttgttagtgttgcaagaaaaactgatggtcgacattgggcagatttgttt
gctgctgctggaagatcaactgagttgtttgaggaatgctttcaaaggagatggtaccgg
actgctgcttgctatatacttgttattgcgaagcttgaaggtcctgctgtgagtcagtac
tgtgcactgcgtttgttgcaggccacgcttgatgaatcgctatatgagcttgctggggaa
ctggtgaggtttcttctcagatctggacgagaatttgaacctgcaccagtggattcggag
aagttatctcctcgattctttggatattttctgtttccttccagttatcaaagacaatct
tttgattcaaaaggcagctcattcaaggagcagaatgcacatgttgcttctgttaagaat
attttagaaagtcatgcaagctttttgatgtcagggaaagaactttcaaagcttgttgca
tttgtgaaaggcacacagtttgacctcatggattatttgcggcgagagagatatggatct
gctcgcttggagaactttgccttagggcttgaacttattggacagaagcttcaaatggga
acactgcaaagtcgattggatgcagaattccttttgtctcagatgtgctctgtcaaattc
aaagaatggattgttgtcctggccacactattgaggcgatctgaggttttatttgattta
tttcaccatgatttgcgtttatgggaggcatatagcataacgttgcagtcacatccggca
tttactgaataccatgatttgctagcaaccttggaggaaatgctttcttctacatctaac
tccgaggataaatga
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