Ipomoea triloba (trilobed morning glory): 116029102
Help
Entry
116029102 CDS
T07384
Name
(RefSeq) transport inhibitor response 1-like protein Os04g0395600
KO
K14485
transport inhibitor response 1
Organism
itr
Ipomoea triloba (trilobed morning glory)
Pathway
itr04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
itr00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
116029102
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
itr04121
]
116029102
Ubiquitin system [BR:
itr04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
116029102
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transp_inhibit
F-box_5
LRR_At5g56370
LRR_4
DUF7885
F-box-like
F-box
Motif
Other DBs
NCBI-GeneID:
116029102
NCBI-ProteinID:
XP_031126853
LinkDB
All DBs
Position
9:complement(3769471..3774296)
Genome browser
AA seq
595 aa
AA seq
DB search
MEMGDPCPKRLKNSADADNSLPESTQLPPPSAFPDEVLEKVLSFLESHKDRNSASLVCKD
WYHAERWSRTKVFIGNCYSVSPEIVARRFPKIKSLTLKGKPRFSDFNLVPQNWGADIHAW
LVVFARAYPLLEELRLKRMTVSDESLEFLATSFPSFKALSLLSCDGFSTDGIEAIATHCK
NLTELDIQENGMDDYNGSWLSCFPEEFTSLEILNFASLNSEVSFDALERLVGRCKSLRVL
KVNKNINPLQLQCLLMRAPQLVELGSGSFLQDLTPRDLSELADVFGKCKNLNTLSGLWEV
TSVFLPVLYPACANLTFLNLSYATIRSSEFAKLLEHCPNLRRLWVLDTVEDKGLEAVGHS
CPLLEELRVFPADPFDLDIVYGVTEKGFIAVSLGCRKLHYVLYFCRQMTNAAVATVVKNC
PDFTHFRLCIMNPGQPDYLTNEPMDEAFGAVVKTCKKLQRLAVSGLLTDLTFEYIGQYAK
NLETLSVAFAGRTDWGMTCVLEGCPKLRKLEIRDCPFGNAALLSGLEKYESMRSLWMSAC
NVTMNGCRYLAKQRPMLNVEVIKEEGSDDCAADKVYVYRTVAGRRRDAPSFVLTF
NT seq
1788 nt
NT seq
+upstream
nt +downstream
nt
atggaaatgggggatccatgcccaaaacgcctcaagaactccgcagatgcagataactcg
ctgcccgagtcaactcagttgcctcctccttctgcctttccagatgaggtattggagaag
gtcctttctttcctggagtcccacaaagacaggaactcagcttcacttgtgtgcaaggac
tggtaccatgccgagaggtggagtcgaactaaggtcttcattggcaactgctactcagtg
tctcctgagattgttgccaggaggtttcccaagattaagagccttactcttaagggaaag
ccgagattttcggatttcaatttggtacctcagaactggggtgctgatattcatgcttgg
ctagttgtttttgccagagcttaccctttgcttgaggagttgaggctgaagagaatgacc
gtgagtgatgagagtttggagtttttagctacatcgttcccgagctttaaggcactctcg
ttgttgagttgtgatggttttagcactgatgggatcgaagccattgctactcactgcaag
aacttgactgagcttgacatacaggagaatggtatggacgattataatggcagttggctc
agttgctttccagaagaatttacgtcactggaaatcctcaactttgcgagcctgaatagc
gaagtcagttttgatgcccttgagagacttgttggtaggtgcaaatcgttgagggttttg
aaggttaataagaacatcaacccactgcaattgcaatgcctgcttatgcgggcgcctcag
ttggtggagcttggtagtggctcgttcctgcaagatctcactcctcgggatttatccgag
ctagcagatgtgtttggcaagtgtaaaaatctgaacaccctttcgggtttatgggaagtc
acctctgtttttcttccggttctgtatccagcttgtgccaatctgacgttcttgaatttg
agctatgcaacgattcggagtagtgaatttgccaagcttcttgagcattgcccaaactta
cgtcgcctctgggtcctcgatacagttgaagataaggggctagaggctgtcgggcacagc
tgtccattgctcgaagaactacgagtcttccccgcagatccttttgatctggatattgtt
tatggggtgaccgagaagggatttattgcagtgtctcttggttgtcgaaaactccattat
gtcctctacttttgccggcaaatgacaaatgctgctgttgctacggttgtgaagaactgt
cccgatttcacccattttcgtctctgcataatgaatccaggccaacccgattacctcaca
aacgagcctatggacgaggccttcggtgctgtggtaaagacgtgcaaaaaactgcagagg
cttgcagtttctgggctgttgacggaccttaccttcgaatatattggccagtatgctaaa
aacctcgaaactctttcggtggcatttgctggccgcactgattgggggatgacgtgtgtg
ctcgaaggctgtccaaagctgagaaagctcgaaataagggactgcccatttggaaatgca
gcattgctatccgggttggagaagtacgaatctatgaggtctctttggatgtcggcctgc
aatgtcaccatgaatggctgtcgttatctcgccaaacagaggccaatgttgaacgtcgag
gtcattaaagaggaggggagtgatgactgcgctgcagataaagtatatgtctatcgaact
gtagcgggacgaaggagagacgccccgtcttttgttctgaccttttaa
DBGET
integrated database retrieval system
